RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NYNRINQ9P2P1 1898 aaKnown RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 PI4KAP42356 2102 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 A0A1W2PQJ5 194 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 TCRBV5S1A1TA0A578 114 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 MED19A0JLT2 244 aaPredicted RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 GOLGA6L3A6NEY3 463 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 LRRC72A6NJI9 287 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 BCAT2O15382 392 aaPredicted RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 SRGAP2O75044 1071 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 GZMAP12544 262 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 GOT1P17174 413 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 CSRP1P21291 193 aaKnown RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 SLC8A1P32418 973 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 ACSL1P33121 698 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 MAPKAPK2P49137 400 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 HDAC4P56524 1084 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 C15orf59Q2T9L4 293 aaPredicted RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 MANEALQ5VSG8 457 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 RETSATQ6NUM9 610 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 DCUN1D2Q6PH85 259 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 WDR59Q6PJI9 974 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 MMAAQ8IVH4 418 aaKnown RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 OR52K2Q8NGK3 314 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 GANCQ8TET4 914 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 TRIM11Q96F44 468 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 BZW2Q9Y6E2 419 aaKnown RBP13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 DOCK4Q8N1I0 1966 aa13.67□□□□□ -0.22
SIRPB3P-201ENST00000340424 FAM170AA1A519 330 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 C1QTNF3-AMACRE9PGA6 284 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 MCF2LO15068 1137 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 MID1O15344 667 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 SLC7A4O43246 635 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 OPHN1O60890 802 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 RNASEH2AO75792 299 aaKnown RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 TPM3P06753 285 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 ADRB1P08588 477 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 CEACAM1P13688 526 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 RHOQP17081 205 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 PSMD8P48556 350 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 AFF3P51826 1226 aaKnown RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 GEMIN4P57678 1058 aaKnown RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 FANCCQ00597 558 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 SLC20A2Q08357 652 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 TEAD4Q15561 434 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 DLG2Q15700 870 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 ACCSLQ4AC99 568 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 EFHC2Q5JST6 749 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 TFAP2DQ7Z6R9 452 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 SLFN11Q7Z7L1 901 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 LUZP1Q86V48 1076 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 STK40Q8N2I9 435 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 OR2T34Q8NGX1 318 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 SYN2Q92777 582 aaPredicted RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 GTPBP2Q9BX10 602 aaKnown RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 CEP44Q9C0F1 390 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 MIR1-1HGQ9H1L0 117 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 C6orf106Q9H6K1 298 aaPredicted RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 DNAAF2Q9NVR5 837 aaKnown RBP13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 ZNF212Q9UDV6 495 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 VPS51Q9UID3 782 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
SIRPB3P-201ENST00000340424 CACNA1EQ15878 2313 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 A0A1W2PP55 124 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 KCNK5O95279 499 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 IL1BP01584 269 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 MYBL1P10243 752 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 SRCP12931 536 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 RRM1P23921 792 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 CD27P26842 260 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 MAOBP27338 520 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 L1CAMP32004 1257 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 HTR7P34969 479 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 NUDT1P36639 197 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 MAPK8P45983 427 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 UBASH3AP57075 661 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 GNA12Q03113 381 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 KLHL30Q0D2K2 578 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 HNRNPDQ14103 355 aaKnown RBP13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 KIAA0895LQ68EN5 471 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms