RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 SEPT3Q9UH03 358 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 SH3BP1Q9Y3L3 701 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 TEX264Q9Y6I9 313 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 CCDC189A1A4V9 331 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 GOLGA6L10A6NI86 522 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 CA3P07451 260 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 HDCP19113 662 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 MTHFRP42898 656 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 MAGEA4P43358 317 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 GNA12Q03113 381 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 ZNF177Q13360 481 aaPredicted RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 DBN1Q16643 649 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 HSP90B2PQ58FF3 399 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NPNTQ6UXI9 565 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 GAREM2Q75VX8 874 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 NPWQ8N729 165 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 IMP4Q96G21 291 aaKnown RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 PBX4Q9BYU1 374 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 SLC39A8Q9C0K1 460 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 DPH5Q9H2P9 285 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 TMBIM4Q9HC24 238 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 MKS1Q9NXB0 559 aa7.33□□□□□ -1.24
NUP43-201ENST00000340413 KIAA1522Q9P206 1035 aaPredicted RBP7.33□□□□□ -1.24
NUP43-201ENST00000340413 SIN3BO75182 1162 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 GSRP00390 522 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PRKCHP24723 683 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 HADHAP40939 763 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PGFP49763 221 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PTPN5P54829 565 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 DYNLT1P63172 113 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ANKRD54Q6NXT1 300 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ZNF567Q8N184 647 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 TTC17Q96AE7 1141 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ACSF2Q96CM8 615 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 TUBGCP5Q96RT8 1024 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 IL22Q9GZX6 179 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 EPB41L4BQ9H329 900 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 TRPC7Q9HCX4 862 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 XPO7Q9UIA9 1087 aaKnown RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 HEY1Q9Y5J3 304 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 OR51B4Q9Y5P0 310 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 NOTCH4Q99466 2003 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 C2CD2LO14523 706 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 MSI1O43347 362 aaKnown RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 CCNB1P14635 433 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PGAM1P18669 254 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ADRA1AP35348 466 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 SERPINB9P50453 376 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 SUOXP51687 545 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 CDR1P51861 262 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 GDF10P55107 478 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 POLD3Q15054 466 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 UAP1Q16222 522 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 C9orf50Q5SZB4 431 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 SDHAF4Q5VUM1 108 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PPP2R2DQ66LE6 453 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ADAT2Q7Z6V5 191 aaKnown RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 LGI2Q8N0V4 545 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 NXPE3Q969Y0 559 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 MTBPQ96DY7 904 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 RBM15Q96T37 977 aaKnown RBP eCLIP7.32□□□□□ -1.244e-6■■■■□ 20
NUP43-201ENST00000340413 CNOT10Q9H9A5 744 aaKnown RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 TRPV5Q9NQA5 729 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PSD3Q9NYI0 1048 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 IPO11Q9UI26 975 aaKnown RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 SLC27A6Q9Y2P4 619 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 HIDE1A8MVS5 230 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 LEFTY2O00292 366 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 TIMM44O43615 452 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 RHOP08100 348 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ALADP13716 330 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 HLA-DPA1P20036 260 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 TNNT3P45378 269 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 PAPOLAP51003 745 aaKnown RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 AP1S1P61966 158 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PDE1BQ01064 536 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 RAP1GAP2Q684P5 730 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 C14orf80Q86SX3 495 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ADAM32Q8TC27 787 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 DEPDC1BQ8WUY9 529 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 TLCD1Q96CP7 247 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 PRICKLE1Q96MT3 831 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 RPRD1AQ96P16 312 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 PSKH2Q96QS6 385 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ACSS3Q9H6R3 686 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 ETNK1Q9HBU6 452 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 EURLQ9NYK6 297 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 NINJ2Q9NZG7 142 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 MAGED2Q9UNF1 606 aaPredicted RBP7.32□□□□□ -1.24
NUP43-201ENST00000340413 CPQQ9Y646 472 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 COL4A3Q01955 1670 aa7.32□□□□□ -1.24
NUP43-201ENST00000340413 FAM237BA0A1B0GVD1 139 aa7.31□□□□□ -1.24
NUP43-201ENST00000340413 SDR42E2A6NKP2 422 aa7.31□□□□□ -1.24
NUP43-201ENST00000340413 RHOCP08134 193 aa7.31□□□□□ -1.24
NUP43-201ENST00000340413 SRPRAP08240 638 aaKnown RBP7.31□□□□□ -1.24
NUP43-201ENST00000340413 MYZAPP0CAP1 466 aa7.31□□□□□ -1.24
NUP43-201ENST00000340413 CDH17Q12864 832 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms