RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 RAD9BQ6WBX8 426 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 ASCL5Q7RTU5 278 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 TMEM139Q8IV31 216 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 SH2D3CQ8N5H7 860 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 FAM160A2Q8N612 972 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-201ENST00000340074 TEKT4Q8WW24 435 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 ACE2Q9BYF1 805 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-201ENST00000340074 CWC15Q9P013 229 aaKnown RBP15.61■□□□□ 0.09
UBE3B-201ENST00000340074 LCMT1Q9UIC8 334 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 TFR2Q9UP52 801 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 SMG5Q9UPR3 1016 aaKnown RBP15.61■□□□□ 0.09
UBE3B-201ENST00000340074 HS3ST2Q9Y278 367 aa15.61■□□□□ 0.09
UBE3B-201ENST00000340074 EDDM13A0A1B0GTR0 161 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 TARSL2A2RTX5 802 aaKnown RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 GOLGA6L6A8MZA4 724 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 DAPK3O43293 454 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ATP9BO43861 1147 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 MAN1A1P33908 653 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ETFBP38117 255 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 P2RY2P41231 377 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 VASPP50552 380 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 TAS2R40P59535 323 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ARF5P84085 180 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 POLD3Q15054 466 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 TCEAL1Q15170 157 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 HADHQ16836 314 aaKnown RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 MAP7D1Q3KQU3 841 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 C9orf64Q5T6V5 341 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 RFX8Q6ZV50 586 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 KBTBD6Q86V97 674 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 FRS2Q8WU20 508 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 PRCCQ92733 491 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 PTPRN2Q92932 1015 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 SIPA1Q96FS4 1042 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 SPACA7Q96KW9 195 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 MAGEH1Q9H213 219 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 NOL6Q9H6R4 1146 aaKnown RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 LUC7LQ9NQ29 371 aaKnown RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 K7ERQ8 282 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ZMPSTE24O75844 475 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 IPO7O95373 1038 aaKnown RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 SRCP12931 536 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 BCKDHBP21953 392 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 GJC1P36383 396 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ARHGAP25P42331 645 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 HCAR3P49019 387 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ZNF135P52742 658 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 DLG2Q15700 870 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 FBRSQ9HAH7 460 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 GRPEL1Q9HAV7 217 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 MBD1Q9UIS9 605 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 RAB23Q9ULC3 237 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 CYP8B1Q9UNU6 501 aa15.6■□□□□ 0.09
UBE3B-201ENST00000340074 REXO2Q9Y3B8 237 aaKnown RBP15.6■□□□□ 0.09
UBE3B-201ENST00000340074 ANKRD36A6QL64 1941 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 RASA4BC9J798 803 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 H3BRJ5 948 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 RASA4O43374 803 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 SMAD6O43541 496 aaKnown RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 GFRA3O60609 400 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ZNF217O75362 1048 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ACADMP11310 421 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ERCC2P18074 760 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ARL4AP40617 200 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 NOP2P46087 812 aaKnown RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 MRE11P49959 708 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 YBEYP58557 167 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 RPS14P62263 151 aaKnown RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 BYSLQ13895 437 aaKnown RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 DPYSQ14117 519 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 PLK5Q496M5 336 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ATP13A4Q4VNC1 1196 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 RETSATQ6NUM9 610 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 Q6ZVU0 165 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 POLNQ7Z5Q5 900 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ZNF354CQ86Y25 554 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 UMODL1-AS1Q8N2C9 162 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 STK40Q8N2I9 435 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ACRBPQ8NEB7 543 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 HMCESQ96FZ2 354 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ZC3H10Q96K80 434 aaKnown RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 RSPH9Q9H1X1 276 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 PCDH18Q9HCL0 1135 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 DONSONQ9NYP3 566 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 USP36Q9P275 1121 aaKnown RBP15.59■□□□□ 0.09
UBE3B-201ENST00000340074 HPCAL4Q9UM19 191 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 ACTL7AQ9Y615 435 aa15.59■□□□□ 0.09
UBE3B-201ENST00000340074 OTOGLQ3ZCN5 2332 aa15.58■□□□□ 0.09
UBE3B-201ENST00000340074 GON4LQ3T8J9 2241 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 IGHV1OR15-9A0A0B4J2B8 117 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 RCCD1A6NED2 376 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 GOLGA6L3A6NEY3 463 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 KDELR3O43731 214 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 CD48P09326 243 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 C7P10643 843 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 SERPINH1P50454 418 aaKnown RBP15.58■□□□□ 0.08
UBE3B-201ENST00000340074 TPMTP51580 245 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 NDST2P52849 883 aa15.58■□□□□ 0.08
UBE3B-201ENST00000340074 CDH6P55285 790 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms