RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MATKP42679 507 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 NAA20P61599 178 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 IRF9Q00978 393 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 NOL9Q5SY16 702 aaKnown RBP16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 PAOXQ6QHF9 649 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 USP13Q92995 863 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 POMPQ9Y244 141 aa16.84■□□□□ 0.29
CDC42EP4-201ENST00000335793 PHGDHO43175 533 aaKnown RBP16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 COX4I1P13073 169 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 TPI1P60174 286 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 SMUG1Q53HV7 270 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 FSTL4Q6MZW2 842 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 TIFABQ6ZNK6 161 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 PDZD4Q76G19 769 aaPredicted RBP16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 DPP9Q86TI2 863 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC16A10Q8TF71 515 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 SGF29Q96ES7 293 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 MARK4Q96L34 752 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 LENG8Q96PV6 779 aaPredicted RBP16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 NUF2Q9BZD4 464 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 TCF7L2Q9NQB0 619 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 MKS1Q9NXB0 559 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 LZTS1Q9Y250 596 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 NME7Q9Y5B8 376 aa16.83■□□□□ 0.29
CDC42EP4-201ENST00000335793 MYOCOSA0A1B0GUC4 107 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 ADCY6O43306 1168 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 GSTT2P0CG29 244 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 GSTT2BP0CG30 244 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 GRM5P41594 1212 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 MAGEA3P43357 314 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 MAGEA6P43360 314 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 ACADSBP45954 432 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 AQP4P55087 323 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 MAP3K7CLP57077 242 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 SLC9B1Q4ZJI4 515 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 FAM91A1Q658Y4 838 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 KLHL35Q6PF15 583 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 CDK4P11802 303 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 HALP42357 657 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 SERPINB8P50452 374 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARHGAP1Q07960 439 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 USP10Q14694 798 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 GSTA3Q16772 222 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 SFT2D3Q587I9 215 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 GRTP1Q5TC63 336 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 SYPL2Q5VXT5 272 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 C9orf57Q5W0N0 161 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARNTL2Q8WYA1 636 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 LRGUKQ96M69 825 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 FCRL3Q96P31 734 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 OLFM3Q96PB7 478 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 CPNE1Q99829 537 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 ILKAPQ9H0C8 392 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 C1orf21Q9H246 121 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARMC7Q9H6L4 198 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 LIN28AQ9H9Z2 209 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 NMRAL1Q9HBL8 299 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 CHRAC1Q9NRG0 131 aa16.83■□□□□ 0.28
CDC42EP4-201ENST00000335793 HACD1B0YJ81 288 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 TRIM13O60858 407 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 C2P06681 752 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 MLNP12872 115 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 ERCC2P18074 760 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 CPOXP36551 454 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 PKNOX1P55347 436 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 ART3Q13508 389 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 TMCO4Q5TGY1 634 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 SLC27A1Q6PCB7 646 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 SNX32Q86XE0 403 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 ERO1BQ86YB8 467 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 CELF6Q96J87 481 aaKnown RBP16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 TNIP3Q96KP6 325 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 KCNK16Q96T55 309 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 ZNF408Q9H9D4 720 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 ADAMTS6Q9UKP5 1117 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 NCAM1P13591 858 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 NAGLUP54802 743 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 RWDD4Q6NW29 188 aaKnown RBP16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 PIP4K2CQ8TBX8 421 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 URGCPQ8TCY9 931 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 OR52B2Q96RD2 323 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 APBA2Q99767 749 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 SIK2Q9H0K1 926 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 GPAMQ9HCL2 828 aa16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 TIMM13Q9Y5L4 95 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP4-201ENST00000335793 JCHAINP01591 159 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CHRNGP07510 517 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CCR10P46092 362 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 GSTM4Q03013 218 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 KLF10Q13118 480 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SLC25A52Q3SY17 297 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 PKDCCQ504Y2 493 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 MAVSQ7Z434 540 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 UNC93AQ86WB7 457 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 NT5DC4Q86YG4 428 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 TMA16Q96EY4 203 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SPATA17Q96L03 361 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms