RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 SPOCK2Q92563 424 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 BTBD10Q9BSF8 475 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TKTL2Q9H0I9 626 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 NOCTQ9UK39 431 aaKnown RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 WEE1P30291 646 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 MATKP42679 507 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF143P52747 638 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 MLLT1Q03111 559 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 GPR158Q5T848 1215 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TIFAQ96CG3 184 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 RMDN2Q96LZ7 410 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 RHOBTB2Q9BYZ6 727 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 ZCWPW1Q9H0M4 648 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 PTPRFP10586 1907 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 A0A1W2PQH9 124 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 TSPAN3O60637 253 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 ITGB1P05556 798 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 FAM189BP81408 668 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 FASTKD1Q53R41 847 aaKnown RBP12.04□□□□□ -0.48
HDAC6-201ENST00000334136 WASHC2DQ5SRD0 308 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 CARNMT1Q8N4J0 409 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 PIK3R5Q8WYR1 880 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 CAAP1Q9H8G2 361 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 MID2Q9UJV3 735 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 YIPF1Q9Y548 306 aa12.04□□□□□ -0.48
HDAC6-201ENST00000334136 GOLGA8QA0A0J9YX86 632 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 GOLGA8OA6NCC3 632 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 MEI4A8MW99 385 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 GOLGA8NF8WBI6 632 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ABLIM1O14639 778 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CYP1A2P05177 515 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 NRIP1P48552 1158 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 MTA1Q13330 715 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 PDK1Q15118 436 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ATP13A4Q4VNC1 1196 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 LRRC8EQ6NSJ5 796 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 LAYNQ6UX15 382 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 MFSD7Q6UXD7 560 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 DDX53Q86TM3 631 aaKnown RBP12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ING2Q9H160 280 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CCDC68Q9H2F9 335 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 FAM96AQ9H5X1 160 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 C20orf96Q9NUD7 363 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-201ENST00000334136 DDX18Q9NVP1 670 aaKnown RBP12.03□□□□□ -0.48
HDAC6-201ENST00000334136 BFARQ9NZS9 450 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 NFKBIAP25963 317 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 GPD2P43304 727 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 FOXD4Q12950 439 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-201ENST00000334136 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CLEC20AQ6ZU45 233 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 DNAJB7Q7Z6W7 309 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-201ENST00000334136 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CMTM5Q96DZ9 223 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CLDND1Q9NY35 253 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 SFMBT1Q9UHJ3 866 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ARHGAP26Q9UNA1 814 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 DTNAQ9Y4J8 743 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 SLC38A8A6NNN8 435 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 TPST1O60507 370 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 PDE5AO76074 875 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CHRNB2P17787 502 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 TFDP3Q5H9I0 405 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ZCCHC23Q6ZST2 131 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 KDELC2Q7Z4H8 507 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 RNF148Q8N7C7 305 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 SCAMP5Q8TAC9 235 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 USP33Q8TEY7 942 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 PPCSQ9HAB8 311 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 CRTAC1Q9NQ79 661 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 HCSTQ9UBK5 93 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
HDAC6-201ENST00000334136 BANF1O75531 89 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 KLHL2O95198 593 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 FGF19O95750 216 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 NUDT2P50583 147 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 ZBTB6Q15916 424 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 ITPRIPL1Q6GPH6 555 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 LGI2Q8N0V4 545 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 SLC39A11Q8N1S5 342 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 CCT7Q99832 543 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 HAUS8Q9BT25 410 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 CYLDQ9NQC7 956 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 PCYOX1Q9UHG3 505 aa12.02□□□□□ -0.48
HDAC6-201ENST00000334136 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 RBAK-RBAKDNI3L0D1 243 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 TBC1D4O60343 1298 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 LCA5LO95447 670 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 CXCL10P02778 98 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 NUMBP49757 651 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 TUBP50607 506 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 SHHQ15465 462 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 TTC39BQ5VTQ0 682 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-201ENST00000334136 C1orf53Q5VUE5 145 aa12.02□□□□□ -0.49
HDAC6-201ENST00000334136 EXD1Q8NHP7 514 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms