RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SPASTQ9UBP0 616 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 VPS51Q9UID3 782 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 STYXL1Q9Y6J8 313 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 EVPLLA8MZ36 301 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ZNF865P0CJ78 1059 aaPredicted RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 TACR2P21452 398 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 PIK3CGP48736 1102 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ALDH18A1P54886 795 aaKnown RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 CDK18Q07002 472 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 CCDC153Q494R4 210 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 SGO1Q5FBB7 561 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 GRAMD4Q6IC98 578 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 KIAA1324Q6UXG2 1013 aaKnown RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ARL8AQ96BM9 186 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 KCNK16Q96T55 309 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 CATSPERZQ9NTU4 200 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 GDAP2Q9NXN4 497 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ANKRD6Q9Y2G4 727 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 PTPRJQ12913 1337 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 SCAMP3O14828 347 aaKnown RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 C1RP00736 705 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 IL1BP01584 269 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 KRT6AP02538 564 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 KRT6BP04259 564 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 LSP1P33241 339 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 RPL22P35268 128 aaKnown RBP11.41□□□□□ -0.58
POLR1B-202ENST00000333990 KRT6CP48668 564 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 PTP4A2Q12974 167 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 SOWAHAQ2M3V2 549 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 GRAMD1BQ3KR37 738 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 HIPK4Q8NE63 616 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 GRIN3AQ8TCU5 1115 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 RUBCNLQ9H714 662 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 ACTR8Q9H981 624 aa11.41□□□□□ -0.58
POLR1B-202ENST00000333990 SLC38A8A6NNN8 435 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 ZNF623O75123 536 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 NDUFS2O75306 463 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 USP12O75317 370 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 LRCH4O75427 683 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 DDHD2O94830 711 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 MAPKAPK2P49137 400 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 TTPAP49638 278 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 ANXA11P50995 505 aaKnown RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 DDX39BQ13838 428 aaKnown RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 HIC1Q14526 733 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 LYPLAL1Q5VWZ2 237 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 TMC3Q7Z5M5 1100 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 PRELID2Q8N945 189 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 CCDC138Q96M89 665 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 FAM161BQ96MY7 647 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 LCA5LO95447 670 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 ALOX15P16050 662 aaPredicted RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 IL10P22301 178 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 SSTR1P30872 391 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 CLNS1AP54105 237 aaKnown RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 SH3BGRP55822 239 aaPredicted RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 GHRHRQ02643 423 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 STX5Q13190 355 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 MMRN1Q13201 1228 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 BOP1Q14137 746 aaKnown RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 MORN1Q5T089 497 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 PRSS55Q6UWB4 352 aaPredicted RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 TUBGCP3Q96CW5 907 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 PCYT2Q99447 389 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 MAGEH1Q9H213 219 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 TMBIM4Q9HC24 238 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 SAE1Q9UBE0 346 aaPredicted RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 STOML1Q9UBI4 398 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 RAB21Q9UL25 225 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 CYBAP13498 195 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 LPOP22079 712 aaPredicted RBP11.4□□□□□ -0.58
POLR1B-202ENST00000333990 ASPAP45381 313 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 GLRBP48167 497 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 PRKAA1Q13131 559 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 LPIN1Q14693 890 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 NPNTQ6UXI9 565 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 RGL4Q8IZJ4 473 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 TFAP2BQ92481 460 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 GBP5Q96PP8 586 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 ASB8Q9H765 288 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 AHSPQ9NZD4 102 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 PCDHA11Q9Y5I1 949 aa11.4□□□□□ -0.58
POLR1B-202ENST00000333990 NEDD8-MDP1E9PL57 170 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 MSI1O43347 362 aaKnown RBP11.39□□□□□ -0.59
POLR1B-202ENST00000333990 ZBTB14O43829 449 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 KCNA4P22459 653 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 HTR1BP28222 390 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 CDK7P50613 346 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 CDH4P55283 916 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 NOMO1Q15155 1222 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 AFTPHQ6ULP2 937 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 OR52K1Q8NGK4 314 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 MS4A4AQ96JQ5 239 aa11.39□□□□□ -0.59
POLR1B-202ENST00000333990 RBBP8Q99708 897 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms