RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PTBP2Q9UKA9 531 aaKnown RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 PHF24Q9UPV7 400 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 SMIM22K7EJ46 135 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 DNAJA2O60884 412 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 FMO5P49326 533 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 CAMK2GQ13555 558 aaPredicted RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 ZCCHC9Q8N567 271 aaKnown RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 FBXO25Q8TCJ0 367 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 PRDM16Q9HAZ2 1276 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 ITGA11Q9UKX5 1188 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 FLT1P17948 1338 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 ERCC2P18074 760 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 EIF4BP23588 611 aaKnown RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 MEIOBQ8N635 442 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 LSM14AQ8ND56 463 aaKnown RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 MCPH1Q8NEM0 835 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 RP9Q8TA86 221 aaKnown RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 GATAD2BQ8WXI9 593 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 PPP1R10Q96QC0 940 aaKnown RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 SDR42E2A6NKP2 422 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 CCR3P51677 355 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 SLC5A3P53794 718 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 SQLEQ14534 574 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 IPCEF1Q8WWN9 437 aaPredicted RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 CATSPERZQ9NTU4 200 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 NUDT14O95848 222 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 CHRNGP07510 517 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 UMPSP11172 480 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 ALDH3A2P51648 485 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 VEPH1Q14D04 833 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 ZYG11AQ6WRX3 759 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 PHC3Q8NDX5 983 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 STARD8Q92502 1023 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 ZNF717Q9BY31 904 aaPredicted RBP10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 SLC22A4Q9H015 551 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 PCYOX1Q9UHG3 505 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 DNAJC16Q9Y2G8 782 aa10.49□□□□□ -0.73
SPTBN1-201ENST00000333896 GSC2O15499 205 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 SUPT7LO94864 414 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ERVK-10P10266 1014 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 HOXD12P35452 270 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 JAK3P52333 1124 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 TBX2Q13207 712 aaPredicted RBP10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PDK1Q15118 436 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 WDR45BQ5MNZ6 344 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 TBC1D21Q8IYX1 336 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PCDH9Q9HC56 1237 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 CLN6Q9NWW5 311 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 GPRC5DQ9NZD1 345 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 MLH3Q9UHC1 1453 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 OR6A2O95222 327 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PGK1P00558 417 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 SERPINF2P08697 491 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 COMTP21964 271 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ETFBP38117 255 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ALDH9A1P49189 494 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 MTMR1Q13613 665 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 FASTKQ14296 549 aaKnown RBP10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 CNSTQ6PJW8 725 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ITFG1Q8TB96 612 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PFDN5Q99471 154 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PPLO60437 1756 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 I3L521 148 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ULK1O75385 1050 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 RASA1P20936 1047 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 THOP1P52888 689 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PRKG2Q13237 762 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 CCNG2Q16589 344 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 SMTNL2Q2TAL5 461 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 RNF44Q7L0R7 432 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 FAM220AQ7Z4H9 259 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 SPPL2AQ8TCT8 520 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 MED8Q96G25 268 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 AIF1LQ9BQI0 150 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 FARSBQ9NSD9 589 aaKnown RBP10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 RPS6KA6Q9UK32 745 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 CORO2BQ9UQ03 480 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PNMA6FA0A0J9YX94 578 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 SLC16A4O15374 487 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PRG2P13727 222 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ADD2P35612 726 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 MOGQ16653 247 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 MIIPQ5JXC2 388 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 FAM92BQ6ZTR7 304 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PLEKHF1Q96S99 279 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 CDRT15Q96T59 188 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 NDUFAF1Q9Y375 327 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 RGS10O43665 173 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 PPM1BO75688 479 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 FSHRP23945 695 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 LRRC70Q7Z2Q7 622 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 ARMC8Q8IUR7 673 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 SPATA2LQ8IUW3 424 aaPredicted RBP10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 FAM20AQ96MK3 541 aa10.48□□□□□ -0.73
SPTBN1-201ENST00000333896 TUBAL3A6NHL2 446 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms