RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TEX44Q53QW1 395 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 UBAP2Q5T6F2 1119 aaKnown RBP23.77■■□□□ 1.4
TSEN54-201ENST00000333213 CXorf57Q6NSI4 855 aaKnown RBP23.77■■□□□ 1.4
TSEN54-201ENST00000333213 CHST9Q7L1S5 443 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 CPXM2Q8N436 756 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 MREGQ8N565 214 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 ARHGEF2Q92974 986 aaKnown RBP23.77■■□□□ 1.4
TSEN54-201ENST00000333213 BHMTQ93088 406 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 AGAP3Q96P47 875 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 LRRC3BQ96PB8 259 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 GORASP1Q9BQQ3 440 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 MTRF1LQ9UGC7 380 aaKnown RBP23.77■■□□□ 1.4
TSEN54-201ENST00000333213 SHOC2Q9UQ13 582 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 TBC1D30Q9Y2I9 924 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 PRUNE2Q8WUY3 3088 aa23.77■■□□□ 1.4
TSEN54-201ENST00000333213 GOLGA8MH3BSY2 632 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 MATN3O15232 486 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 OPHN1O60890 802 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 TBL1XO60907 577 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 PPFIA2O75334 1257 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 YBEYP58557 167 aaPredicted RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF77Q15935 545 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 UAP1Q16222 522 aaPredicted RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 FSCBQ5H9T9 825 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ANKRD54Q6NXT1 300 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ARHGEF18Q6ZSZ5 1173 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 PID1Q7Z2X4 250 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 PCGF5Q86SE9 256 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ZBTB9Q96C00 473 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 TMA16Q96EY4 203 aaKnown RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 RETREG1Q9H6L5 497 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF510Q9Y2H8 683 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 MYO18AQ92614 2054 aaKnown RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 CCNB1P14635 433 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 DLX2Q07687 328 aaPredicted RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ADAM15Q13444 863 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 SERINC3Q13530 473 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 GRIN2CQ14957 1233 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 PARP15Q460N3 678 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 LRRC49Q8IUZ0 686 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 NPAS3Q8IXF0 933 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ZCCHC9Q8N567 271 aaKnown RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 TDRD5Q8NAT2 981 aaKnown RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 OR7D4Q8NG98 312 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 WFDC5Q8TCV5 224 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 USP33Q8TEY7 942 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 TEKT5Q96M29 485 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 IL12RB2Q99665 862 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 CLEC1BQ9P126 229 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 KLHL8Q9P2G9 620 aaPredicted RBP23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ATP8A1Q9Y2Q0 1164 aa23.76■■□□□ 1.39
TSEN54-201ENST00000333213 ARHGAP42A6NI28 874 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 MTSS1O43312 755 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 PSMB4P28070 264 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 MAGEA6P43360 314 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 IFI35P80217 286 aaPredicted RBP23.75■■□□□ 1.39
TSEN54-201ENST00000333213 SKOR1P84550 965 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 GNA12Q03113 381 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 TTC39BQ5VTQ0 682 aaPredicted RBP23.75■■□□□ 1.39
TSEN54-201ENST00000333213 MAML1Q92585 1016 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 RSPRY1Q96DX4 576 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 FERMT1Q9BQL6 677 aa23.75■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 STK10O94804 968 aaKnown RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 MAGEA9P43362 315 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 CORO7P57737 925 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 USP4Q13107 963 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF177Q13360 481 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 SEMA5AQ13591 1074 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 DNAJC21Q5F1R6 531 aaKnown RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 C4orf22Q6V702 233 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 TPGS1Q6ZTW0 290 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 HOOK3Q86VS8 718 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 CCDC25Q86WR0 208 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 HJURPQ8NCD3 748 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 FGF13Q92913 245 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 EPB41L4BQ9H329 900 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 PLK2Q9NYY3 685 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 IGSF9Q9P2J2 1179 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 ZMYM5Q9UJ78 669 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 CLEC4EQ9ULY5 219 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 COLQQ9Y215 455 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 CHADO15335 359 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 APRTP07741 180 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 HOXD9P28356 352 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 MTM1Q13496 603 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 ADGRE1Q14246 886 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 TIGD7Q6NT04 549 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 SETD3Q86TU7 594 aaPredicted RBP23.74■■□□□ 1.39
TSEN54-201ENST00000333213 RUFY1Q96T51 708 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 VAT1Q99536 393 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 LINC00597Q9H2U6 94 aa23.74■■□□□ 1.39
TSEN54-201ENST00000333213 TBX10O75333 385 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 GLDCP23378 1020 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 FSHRP23945 695 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 HSD17B3P37058 310 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 PARP6Q2NL67 630 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 FNBP1LQ5T0N5 605 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 C6orf118Q5T5N4 469 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 CARNMT1Q8N4J0 409 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms