RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TEDDM1Q5T9Z0 273 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 CRLF3Q8IUI8 442 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 KLHDC8BQ8IXV7 354 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 DCP1BQ8IZD4 617 aaKnown RBP17.74■□□□□ 0.43
DDX28-201ENST00000332395 TBC1D10AQ9BXI6 508 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 SNX15Q9NRS6 342 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 OSER1Q9NX31 292 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 SOX13Q9UN79 622 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 C15orf41Q9Y2V0 281 aa17.74■□□□□ 0.43
DDX28-201ENST00000332395 AP3B1O00203 1094 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 MOCS2O96007 188 aaPredicted RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 PTPN4P29074 926 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 LIMK2P53671 638 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 RPL10AP62906 217 aaKnown RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 INSCQ1MX18 579 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 SDHAF4Q5VUM1 108 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 MBLAC2Q68D91 279 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 LINC00523Q86TU6 105 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 DCLK2Q8N568 766 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 ISL2Q96A47 359 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 ATXN7L3BQ96GX2 97 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 PRR11Q96HE9 360 aaPredicted RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 ZNF419Q96HQ0 510 aaPredicted RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 SERPINB11Q96P15 392 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 SLC39A8Q9C0K1 460 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 BATF3Q9NR55 127 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 NDFIP2Q9NV92 336 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 THAP1Q9NVV9 213 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 DNAJB4Q9UDY4 337 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 AAR2Q9Y312 384 aaKnown RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 HBS1LQ9Y450 684 aaKnown RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 MOXD2PA6NHM9 499 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 KCNU1A8MYU2 1149 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 PSMD3O43242 534 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 MAFKO60675 156 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 NEBLO76041 1014 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 MAGEA12P43365 314 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 TUBP50607 506 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 FAM189BP81408 668 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 FSTL4Q6MZW2 842 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 CMC1Q7Z7K0 106 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 KCNMB4Q86W47 210 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 SPATA22Q8NHS9 363 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 PPP1R14CQ8TAE6 165 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 AZIN2Q96A70 460 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 FUBP3Q96I24 572 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX28-201ENST00000332395 IL12RB2Q99665 862 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 C20orf96Q9NUD7 363 aaPredicted RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 ARL8BQ9NVJ2 186 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 MARCOQ9UEW3 520 aaPredicted RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 SRRDQ9UH36 339 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 SCML2Q9UQR0 700 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 HS3ST4Q9Y661 456 aa17.73■□□□□ 0.43
DDX28-201ENST00000332395 MRPL42Q9Y6G3 142 aaKnown RBP17.73■□□□□ 0.43
DDX28-201ENST00000332395 E9PAM4 449 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 ANP32DO95626 131 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 PROCP04070 461 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 PRKCGP05129 697 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 KITP10721 976 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 FGF3P11487 239 aaPredicted RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 GPR15P49685 360 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 SERPINB8P50452 374 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 PCLAFQ15004 111 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 NFE2Q16621 373 aaPredicted RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 DDR2Q16832 855 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 HSF5Q4G112 596 aaPredicted RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 TTC7BQ86TV6 843 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 ALYREFQ86V81 257 aaKnown RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 MON1AQ86VX9 555 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 KIRREL3Q8IZU9 778 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 NUP93Q8N1F7 819 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 AGAP11Q8TF27 550 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 PTCD3Q96EY7 689 aaKnown RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 TUBB6Q9BUF5 446 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 TMEM216Q9P0N5 145 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 FCHO1O14526 889 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 MATN3O15232 486 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 MT-CYBP00156 380 aaPredicted RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 F7P08709 466 aaPredicted RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 KCNA4P22459 653 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 DNAJB2P25686 324 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 NMBRP28336 390 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 CDK18Q07002 472 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 RTL3Q8N8U3 475 aaKnown RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 FAM193BQ96PV7 902 aaPredicted RBP17.72■□□□□ 0.43
DDX28-201ENST00000332395 FCRL5Q96RD9 977 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 NMUR2Q9GZQ4 415 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 GLOD4Q9HC38 313 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 MPP6Q9NZW5 540 aa17.72■□□□□ 0.43
DDX28-201ENST00000332395 E2F8A0AVK6 867 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 AOC2O75106 756 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 GRK4P32298 578 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 GMPRP36959 345 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 AQP5P55064 265 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 SATB1Q01826 763 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 MPP3Q13368 585 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 VARS2Q5ST30 1063 aaKnown RBP17.71■□□□□ 0.43
DDX28-201ENST00000332395 C14orf80Q86SX3 495 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms