RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 DYTNA2CJ06 578 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 SAC3D1A6NKF1 404 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 VAPBO95292 243 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ATP5BP06576 529 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 GARSP41250 739 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 NDST2P52849 883 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 LAMTOR4Q0VGL1 99 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 SLC44A4Q53GD3 710 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 BOLA3Q53S33 107 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 JADE1Q6IE81 842 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZBTB8OSQ8IWT0 167 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 MCUQ8NE86 351 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 HTR3CQ8WXA8 447 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ASB16Q96NS5 453 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 FERD3LQ96RJ6 166 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 APBA2Q99767 749 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 DEFB129Q9H1M3 183 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 EPB41L1Q9H4G0 881 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 NOL11Q9H8H0 719 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 GMPR2Q9P2T1 348 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 CPSF3Q9UKF6 684 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 RNF11Q9Y3C5 154 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PCDHB12Q9Y5F1 795 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 COMMD10Q9Y6G5 202 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 KCNU1A8MYU2 1149 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 XPOTO43592 962 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 HCRTO43612 131 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 TRIM13O60858 407 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PAX3P23760 479 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 HMGCS2P54868 508 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 CDK18Q07002 472 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZNF460Q14592 562 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ARL13AQ5H913 290 aaPredicted RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 FSTL4Q6MZW2 842 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PID1Q7Z2X4 250 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 NUP93Q8N1F7 819 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZNF786Q8N393 782 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 FCRL3Q96P31 734 aaPredicted RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 SLC29A1Q99808 456 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 STN1Q9H668 368 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 IL1RL2Q9HB29 575 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 AP4E1Q9UPM8 1137 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 LACTBL1A8MY62 500 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 RNF103O00237 685 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 EPHX2P34913 555 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 GRIA4P48058 902 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 HARS2P49590 506 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 STAT5BP51692 787 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 AP3M2P53677 418 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PLOD1Q02809 727 aaPredicted RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 PDK2Q15119 407 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 MGAT5BQ3V5L5 792 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 RPS27LQ71UM5 84 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 CCDC185Q8N715 623 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 FAM110BQ8TC76 370 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 GIPC3Q8TF64 312 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 DDI1Q8WTU0 396 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 GCOM2Q9BZD3 368 aaPredicted RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZNF696Q9H7X3 374 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 NMRAL1Q9HBL8 299 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 TIMMDC1Q9NPL8 285 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 GTSE1Q9NYZ3 720 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 THEGQ9P2T0 379 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZDHHC2Q9UIJ5 367 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 AP1G1O43747 822 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 CLIC3O95833 236 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PIGRP01833 764 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 C2P06681 752 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 MYL4P12829 197 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 GP5P40197 560 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 CLCN3P51790 818 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ITGA7Q13683 1181 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PIGGQ5H8A4 983 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 TIFABQ6ZNK6 161 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 RNF168Q8IYW5 571 aaPredicted RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 FAM47BQ8NA70 645 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ADCY4Q8NFM4 1077 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 APBB2Q92870 758 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 MFSD3Q96ES6 412 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 CERS2Q96G23 380 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 HPDLQ96IR7 371 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 PAIP1Q9H074 479 aaKnown RBP8.03□□□□□ -1.12
VMA21-201ENST00000330374 FAM96AQ9H5X1 160 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 NRBP2Q9NSY0 501 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 DTLQ9NZJ0 730 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 ZMIZ1Q9ULJ6 1067 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 SNX9Q9Y5X1 595 aa8.03□□□□□ -1.12
VMA21-201ENST00000330374 FAM149AA5PLN7 773 aa8.02□□□□□ -1.13
VMA21-201ENST00000330374 FAM189A1O60320 539 aa8.02□□□□□ -1.13
VMA21-201ENST00000330374 CILPO75339 1184 aa8.02□□□□□ -1.13
VMA21-201ENST00000330374 TIPRLO75663 272 aa8.02□□□□□ -1.13
VMA21-201ENST00000330374 ENDOD1O94919 500 aa8.02□□□□□ -1.13
VMA21-201ENST00000330374 POLBP06746 335 aa8.02□□□□□ -1.13
VMA21-201ENST00000330374 PIM1P11309 404 aaPredicted RBP8.02□□□□□ -1.13
VMA21-201ENST00000330374 CNTFP26441 200 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms