RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 NDUFS2O75306 463 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
CLRN1-203ENST00000328863 CD6P30203 668 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 OXTRP30559 389 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
CLRN1-203ENST00000328863 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 PPP6R3Q5H9R7 873 aaPredicted RBP15.18■□□□□ 0.02
CLRN1-203ENST00000328863 SPDYCQ5MJ68 293 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 CYP2U1Q7Z449 544 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 ZNF354CQ86Y25 554 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 RHOT2Q8IXI1 618 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 SH2D3CQ8N5H7 860 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 OR7D4Q8NG98 312 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 OR8D1Q8WZ84 308 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 SPON2Q9BUD6 331 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 RSPH9Q9H1X1 276 aaPredicted RBP15.18■□□□□ 0.02
CLRN1-203ENST00000328863 MAGEH1Q9H213 219 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 ZWILCHQ9H900 591 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 HPCAL4Q9UM19 191 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 GPR179Q6PRD1 2367 aa15.18■□□□□ 0.02
CLRN1-203ENST00000328863 ZSCAN5CA6NGD5 496 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 C1QTNF3-AMACRE9PGA6 284 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 H3BRJ5 948 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ALOX15BO15296 676 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ATP9BO43861 1147 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 FOXD2O60548 495 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 SNAP91O60641 907 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ADH1BP00325 375 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 IGLV3-19P01714 112 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 SRCP12931 536 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 CDC25BP30305 580 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 CYLC1P35663 651 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 MPLP40238 635 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ARL4AP40617 200 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 SSR1P43307 286 aaKnown RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 DHPSP49366 369 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 SERPINH1P50454 418 aaKnown RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 POLD3Q15054 466 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 DPYSL2Q16555 572 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 SMTNL2Q2TAL5 461 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 PARP15Q460N3 678 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ARTNQ5T4W7 220 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 LYSMD4Q5XG99 296 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 C22orf39Q6P5X5 142 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ARFGAP1Q8N6T3 406 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 TEKT4Q8WW24 435 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 RFFLQ8WZ73 363 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 BTBD6Q96KE9 485 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 PANX2Q96RD6 677 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 CD93Q9NPY3 652 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 SLCO3A1Q9UIG8 710 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ABCA7Q8IZY2 2146 aa15.17■□□□□ 0.02
CLRN1-203ENST00000328863 ZFHX2Q9C0A1 2572 aaPredicted RBP15.17■□□□□ 0.02
CLRN1-203ENST00000328863 RIF1Q5UIP0 2472 aaKnown RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 DAPK3O43293 454 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 C7P10643 843 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 MAN1A1P33908 653 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 RECQLP46063 649 aaPredicted RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 PSMD8P48556 350 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 TPMTP51580 245 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 YBEYP58557 167 aaPredicted RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 RPS14P62263 151 aaKnown RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 ARF5P84085 180 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 CREB5Q02930 508 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 SLC25A11Q02978 314 aaKnown RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 SPA17Q15506 151 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 DLG2Q15700 870 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 CST6Q15828 149 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 CA9Q16790 459 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 BOLA3Q53S33 107 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 C9orf64Q5T6V5 341 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 DAB2IPQ5VWQ8 1189 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 RFX8Q6ZV50 586 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 Q6ZVU0 165 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 CYP4V2Q6ZWL3 525 aaPredicted RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 CCDC170Q8IYT3 715 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 FRS2Q8WU20 508 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 HSPH1Q92598 858 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 PTPRN2Q92932 1015 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 ARHGEF2Q92974 986 aaKnown RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 KCTD15Q96SI1 283 aaPredicted RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 ACE2Q9BYF1 805 aaPredicted RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 CEP44Q9C0F1 390 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 PABPC3Q9H361 631 aaKnown RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 MTG2Q9H4K7 406 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 ITM2CQ9NQX7 267 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 NDFIP2Q9NV92 336 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 MBD1Q9UIS9 605 aaPredicted RBP15.16■□□□□ 0.02
CLRN1-203ENST00000328863 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
CLRN1-203ENST00000328863 GVINP1Q7Z2Y8 2422 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 MEI4A8MW99 385 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 PROSCO94903 275 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 GOT1P17174 413 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms