RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ROPN1Q9HAT0 212 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 NDFIP2Q9NV92 336 aa19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 ZFP37Q9Y6Q3 630 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-201ENST00000327304 HACD1B0YJ81 288 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 SHBGP04278 402 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 RHOQP17081 205 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 SLC10A2Q12908 348 aaPredicted RBP19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 SLC45A4Q5BKX6 768 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 RABGAP1LQ5R372 815 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 TP53INP2Q8IXH6 220 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 CCDC33Q8N5R6 958 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 RTL3Q8N8U3 475 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 CPT1BQ92523 772 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 LINC00597Q9H2U6 94 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 CATSPERBQ9H7T0 1116 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 WNT6Q9Y6F9 365 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 KCNN4O15554 427 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 ZNF189O75820 626 aaPredicted RBP19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 LAMP2P13473 410 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 RBL1P28749 1068 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 PAFAH1B3Q15102 231 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 TANGO2Q6ICL3 276 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 CPXM2Q8N436 756 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 TDRD5Q8NAT2 981 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 PGM2Q96G03 612 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 PWWP2AQ96N64 755 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 TTC25Q96NG3 672 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 OLFM3Q96PB7 478 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 KLC2Q9H0B6 622 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 NINJ2Q9NZG7 142 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 DTLQ9NZJ0 730 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 ZNF212Q9UDV6 495 aa19.21■□□□□ 0.67
EXOSC3-201ENST00000327304 HEPACAM2A8MVW5 462 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 WASH4PA8MWX3 477 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 EIF3HO15372 352 aaKnown RBP eCLIP19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 SP100P23497 879 aaPredicted RBP19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 MAGEA4P43358 317 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 SMAD4Q13485 552 aaKnown RBP19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 C6orf118Q5T5N4 469 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 KCTD16Q68DU8 428 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 CENPUQ71F23 418 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 QKIQ96PU8 341 aaKnown RBP eCLIP19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 TMEM248Q9NWD8 314 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 RAD54BQ9Y620 910 aa19.2■□□□□ 0.66
EXOSC3-201ENST00000327304 MBTPS2O43462 519 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 TBL1XO60907 577 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 ABHD2P08910 425 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 CBLBQ13191 982 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 KYNUQ16719 465 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 HJURPQ8NCD3 748 aaPredicted RBP19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 BPIFB1Q8TDL5 484 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 BHMTQ93088 406 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 CELF6Q96J87 481 aaKnown RBP19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 ZFP14Q9HCL3 533 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 PRUNE2Q8WUY3 3088 aa19.19■□□□□ 0.66
EXOSC3-201ENST00000327304 ALOX15BO15296 676 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 CHADO15335 359 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 SKOR1P84550 965 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 VITQ6UXI7 678 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TPGS1Q6ZTW0 290 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 B4GALNT4Q76KP1 1039 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 LRRN4Q8WUT4 740 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 HLA-CQ95604 372 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TMA16Q96EY4 203 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 ASIC4Q96FT7 647 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 CENPHQ9H3R5 247 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 DNAJC17Q9NVM6 304 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 OBP2AQ9NY56 170 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TBC1D14Q9P2M4 693 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 A6NNZ2 444 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 GCATO75600 419 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TCEA3O75764 348 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 ACSL3O95573 720 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 ARL4CP56559 192 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 HIF1AQ16665 826 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TUBB8Q3ZCM7 444 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 UBAP2Q5T6F2 1119 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TTC39BQ5VTQ0 682 aaPredicted RBP19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 PARM1Q6UWI2 310 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 KDM7AQ6ZMT4 941 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 ARHGAP12Q8IWW6 846 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 SH2D3CQ8N5H7 860 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 TFB1MQ8WVM0 346 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 KXD1Q9BQD3 176 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 PLA2G2FQ9BZM2 168 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 NOL6Q9H6R4 1146 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 SAYSD1Q9NPB0 183 aa19.18■□□□□ 0.66
EXOSC3-201ENST00000327304 A0A1B0GVM2 712 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 TCAF2A6NFQ2 919 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 C5orf60A6NFR6 353 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 NR1D1P20393 614 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 SERPINB6P35237 376 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 CDH4P55283 916 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 BASP1P80723 227 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 TRIM68Q6AZZ1 485 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 PPP1R21Q6ZMI0 780 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 CHST9Q7L1S5 443 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 OTOP3Q7RTS5 596 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 TMEM25Q86YD3 366 aa19.17■□□□□ 0.66
EXOSC3-201ENST00000327304 ARFGAP2Q8N6H7 521 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms