RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CD1EP15812 388 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PIK3R1P27986 724 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CYLC2Q14093 348 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 ITPRIPL1Q6GPH6 555 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PRRT2Q7Z6L0 340 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 DENND6AQ8IWF6 608 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 GPC2Q8N158 579 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 SEMA6AQ9H2E6 1030 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 XPR1Q9UBH6 696 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CDYLQ9Y232 598 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 FNDC3AQ9Y2H6 1198 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PDE4DIPQ5VU43 2346 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 MLNP12872 115 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 ADRA1BP35368 520 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 NIPAL4Q0D2K0 466 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CCNIQ14094 377 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 RPS27LQ71UM5 84 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 OSTM1Q86WC4 334 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 KYQ8NBH2 561 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PHF21BQ96EK2 531 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 NPAS2Q99743 824 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 IL1RL2Q9HB29 575 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 OR12D3Q9UGF7 316 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CENPFP49454 3210 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 NEMP2A6NFY4 417 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 TIMM44O43615 452 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CSPG5O95196 566 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 FESP07332 822 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 THRAP10827 490 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 VCLP18206 1134 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PMLP29590 882 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 ALDH1A3P47895 512 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 LIMK2P53671 638 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 MPP1Q00013 466 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 ROR2Q01974 943 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CSHL1Q14406 222 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 PDK3Q15120 406 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 NT5DC4Q86YG4 428 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 FBXW8Q8N3Y1 598 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 BHLHE22Q8NFJ8 381 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 OR6P1Q8NGX9 317 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 KBTBD7Q8WVZ9 684 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 NDNQ99608 321 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 FICDQ9BVA6 458 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 SORCS3Q9UPU3 1222 aa13.13□□□□□ -0.31
HMGCS1-201ENST00000325110 CPOXP36551 454 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 NRF1Q16656 503 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 LSM12Q3MHD2 195 aaKnown RBP13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ATG14Q6ZNE5 492 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 PPTC7Q8NI37 304 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 TRPV6Q9H1D0 765 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 PCDHB12Q9Y5F1 795 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 CXCL11O14625 94 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 STAMBPO95630 424 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 MAGEA3P43357 314 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 BEX3Q00994 111 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 FOLH1Q04609 750 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ZBTB17Q13105 803 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 CYP2R1Q6VVX0 501 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 JADE3Q92613 823 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 GATA6Q92908 595 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 C16orf70Q9BSU1 422 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 FTHL17Q9BXU8 183 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 Q9H521 79 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 MID2Q9UJV3 735 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 WDR81Q562E7 1941 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ATP6AP2A0A1C7CYW4 349 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 OR6B1O95007 311 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 XRCC1P18887 633 aaPredicted RBP13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 THOP1P52888 689 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 LILRA4P59901 499 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 GSTA3Q16772 222 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 TMCO4Q5TGY1 634 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ARHGAP17Q68EM7 881 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ZNF470Q6ECI4 717 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 TIFABQ6ZNK6 161 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 SATL1Q86VE3 508 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 LPPQ93052 612 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 EME1Q96AY2 570 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 NR1H4Q96RI1 486 aaPredicted RBP13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 GPAMQ9HCL2 828 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 ACOT9Q9Y305 439 aa13.12□□□□□ -0.31
HMGCS1-201ENST00000325110 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms