RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR8H3Q8N146 312 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 OR2T34Q8NGX1 318 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 OR2T3Q8NH03 318 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 RDH11Q8TC12 318 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 NIF3L1Q9GZT8 377 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF236Q9UL36 1845 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FAM172BPA6NC97 362 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TRIM38O00635 465 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MSH3P20585 1137 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 GARTP22102 1010 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 GP5P40197 560 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 GLRBP48167 497 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 EMC10Q5UCC4 262 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 UGT3A1Q6NUS8 523 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 EIF3MQ7L2H7 374 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SENP6Q9GZR1 1112 aaPredicted RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SMPD3Q9NY59 655 aaPredicted RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SCAF8Q9UPN6 1271 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 EEF2KO00418 725 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SOAT2O75908 522 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PCNAP12004 261 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FECHP22830 423 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 NME5P56597 212 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 RRM2BQ7LG56 351 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CYP2U1Q7Z449 544 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CCDC36Q8IYA8 594 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PGAM4Q8N0Y7 254 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 C10orf82Q8WW14 230 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SLC5A5Q92911 643 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PIDD1Q9HB75 910 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CCDC177Q9NQR7 707 aaPredicted RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ZGRF1Q86YA3 2104 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PLK4O00444 970 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SNRPB2P08579 225 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CCNA1P78396 465 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TBC1D21Q8IYX1 336 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 IRGQQ8WZA9 623 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TTYH3Q9C0H2 523 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CDH9Q9ULB4 789 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FREM3P0C091 2139 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PSMD12O00232 456 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 BMP10O95393 424 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 GABRB2P47870 512 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 BST1Q10588 318 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF57Q68EA5 555 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 SNRNP48Q6IEG0 339 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ERICH5Q6P6B1 374 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 C12orf50Q8NA57 414 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 GANQ9H2C0 597 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 FKBP14Q9NWM8 211 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 H2AFY2Q9P0M6 372 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PADI4Q9UM07 663 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 DRG1Q9Y295 367 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 AAR2Q9Y312 384 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PTPRDP23468 1912 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 A0A0B4J269 797 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 DGAT1O75907 488 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 LGALS3BPQ08380 585 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 FAAP100Q0VG06 881 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MSLNQ13421 630 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 QRICH1Q2TAL8 776 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PYDC2Q56P42 97 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MTX3Q5HYI7 312 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 GLRA4Q5JXX5 417 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 DENND5AQ6IQ26 1287 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZCCHC23Q6ZST2 131 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MYO1HQ8N1T3 1032 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ISOC1Q96CN7 298 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PI4K2AQ9BTU6 479 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CPVLQ9H3G5 476 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 NMRAL1Q9HBL8 299 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CASS4Q9NQ75 786 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PFDN2Q9UHV9 154 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 FNDC3AQ9Y2H6 1198 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF510Q9Y2H8 683 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 WASF2Q9Y6W5 498 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 APOC4-APOC2K7ER74 178 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MYL12BO14950 172 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 APOC2P02655 101 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 S100A6P06703 90 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ACADSBP45954 432 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MED1Q15648 1581 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF605Q86T29 641 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 KCNMB4Q86W47 210 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM132CQ8N3T6 1108 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 RNF148Q8N7C7 305 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CDH19Q9H159 772 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 C1orf21Q9H246 121 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 KCTD10Q9H3F6 313 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MORF4L1Q9UBU8 362 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 NDUFS3O75489 264 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ANXA9O76027 345 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 RECQL5O94762 991 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CAPGP40121 348 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CDK9P50750 372 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF543Q08ER8 600 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PKN1Q16512 942 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 NFIL3Q16649 462 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ALDH16A1Q8IZ83 802 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms