RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 DGCR14Q96DF8 476 aaKnown RBP13.35□□□□□ -0.27
CPNE1-201ENST00000317677 TIMMDC1Q9NPL8 285 aa13.35□□□□□ -0.27
CPNE1-201ENST00000317677 PRDM5Q9NQX1 630 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-201ENST00000317677 OSER1Q9NX31 292 aa13.35□□□□□ -0.27
CPNE1-201ENST00000317677 EURLQ9NYK6 297 aa13.35□□□□□ -0.27
CPNE1-201ENST00000317677 LRFN2Q9ULH4 789 aa13.35□□□□□ -0.27
CPNE1-201ENST00000317677 CHMP2BQ9UQN3 213 aa13.35□□□□□ -0.27
CPNE1-201ENST00000317677 CLUHO75153 1309 aa13.35□□□□□ -0.27
CPNE1-201ENST00000317677 TBKBP1A7MCY6 615 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 FOXO6A8MYZ6 492 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 E7ESA3 106 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 H3BRJ5 948 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 TBC1D4O60343 1298 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 GCAP28676 217 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 SERPINB8P50452 374 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 GPX6P59796 221 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 YWHAGP61981 247 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 PDIA2Q13087 525 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ADRM1Q16186 407 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 DDR2Q16832 855 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 EFHC2Q5JST6 749 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 FUT10Q6P4F1 479 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 RFX8Q6ZV50 586 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 PCGF5Q86SE9 256 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ANKMY2Q8IV38 441 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 SCN4BQ8IWT1 228 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ATAD1Q8NBU5 361 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ZNF398Q8TD17 642 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 TRPV5Q9NQA5 729 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 TMEM98Q9Y2Y6 226 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 CFAP69A5D8W1 941 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 EEF2KO00418 725 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 CCDC22O60826 627 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 SOAT2O75908 522 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 METTL18O95568 372 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 EFEMP2O95967 443 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ABHD2P08910 425 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 SPATA31D3P0C874 917 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 NR2C2P49116 596 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 OXCT1P55809 520 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 IL9RQ01113 521 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 MPP2Q14168 576 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 GRM2Q14416 872 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 PAFAH1B3Q15102 231 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 SPATA31D4Q6ZUB0 917 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ARMCX6Q7L4S7 300 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 CDKL3Q8IVW4 592 aaPredicted RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 ZBED8Q8IZ13 594 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 DCP1BQ8IZD4 617 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 MGARPQ8TDB4 240 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 CASP10Q92851 521 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 TUBGCP5Q96RT8 1024 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 LGMNQ99538 433 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 RRN3Q9NYV6 651 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 XPO7Q9UIA9 1087 aaKnown RBP13.34□□□□□ -0.27
CPNE1-201ENST00000317677 NUDT5Q9UKK9 219 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 NEU3Q9UQ49 428 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 TMED5Q9Y3A6 229 aa13.34□□□□□ -0.27
CPNE1-201ENST00000317677 A0A1W2PQH9 124 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 ALDH2P05091 517 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 HNRNPCP07910 306 aaKnown RBP eCLIP13.33□□□□□ -0.288e-7■■■□□ 17.7
CPNE1-201ENST00000317677 CRABP2P29373 138 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 SLC18A1P54219 525 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 AIF1P55008 147 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 ADARP55265 1226 aaKnown RBP13.33□□□□□ -0.28
CPNE1-201ENST00000317677 CYLC2Q14093 348 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-201ENST00000317677 PRKD1Q15139 912 aaPredicted RBP13.33□□□□□ -0.28
CPNE1-201ENST00000317677 HIF1AQ16665 826 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 ACSBG2Q5FVE4 666 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 NPWQ8N729 165 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 FUBP3Q96I24 572 aaKnown RBP eCLIP13.33□□□□□ -0.28
CPNE1-201ENST00000317677 C8orf48Q96LL4 319 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 VN1R3Q9BXE9 311 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 TKTL2Q9H0I9 626 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 RAB6BQ9NRW1 208 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 NKIRAS1Q9NYS0 192 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 PAK5Q9P286 719 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 LGALS13Q9UHV8 139 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 ANGPTL2Q9UKU9 493 aa13.33□□□□□ -0.28
CPNE1-201ENST00000317677 SF3B1O75533 1304 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■■■■■ 85.9
CPNE1-201ENST00000317677 F8W8V4 182 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 IRAK2O43187 625 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 GCATO75600 419 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ASMTLO95671 621 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 CLTBP09497 229 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 UBTFL6P0CB48 400 aaPredicted RBP13.32□□□□□ -0.28
CPNE1-201ENST00000317677 BRAFP15056 766 aa13.32□□□□□ -0.28
CPNE1-201ENST00000317677 ERCC2P18074 760 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms