RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 HP1BP3Q5SSJ5 553 aaPredicted RBP25.5■■□□□ 1.67
CDPF1-201ENST00000314567 EP400NLQ6ZTU2 488 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 PALM2Q8IXS6 379 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 MICALL1Q8N3F8 863 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 LZTR1Q8N653 840 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 NPWQ8N729 165 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 ADAMTS19Q8TE59 1207 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 C1orf74Q96LT6 269 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 XAB2Q9HCS7 855 aaKnown RBP25.5■■□□□ 1.67
CDPF1-201ENST00000314567 SLC24A2Q9UI40 661 aa25.5■■□□□ 1.67
CDPF1-201ENST00000314567 UNC80Q8N2C7 3258 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 STC2O76061 302 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 APOEP02649 317 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 ARTNQ5T4W7 220 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 SYCE2Q6PIF2 218 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 ZSWIM3Q96MP5 696 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 WDR83Q9BRX9 315 aaKnown RBP25.49■■□□□ 1.67
CDPF1-201ENST00000314567 IGSF9Q9P2J2 1179 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 HBS1LQ9Y450 684 aaKnown RBP25.49■■□□□ 1.67
CDPF1-201ENST00000314567 SRRM3A6NNA2 597 aaPredicted RBP25.49■■□□□ 1.67
CDPF1-201ENST00000314567 GARSP41250 739 aaKnown RBP25.49■■□□□ 1.67
CDPF1-201ENST00000314567 WASHC5Q12768 1159 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 PARP6Q2NL67 630 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 KLHL38Q2WGJ6 581 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 NADSYN1Q6IA69 706 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 ELMSAN1Q6PJG2 1045 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 MYEOVQ96EZ4 313 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 VAT1Q99536 393 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 CCL26Q9Y258 94 aa25.49■■□□□ 1.67
CDPF1-201ENST00000314567 BRWD1Q9NSI6 2320 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 ELK3P41970 407 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 MAGEA3P43357 314 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 NR1H3Q13133 447 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 MTA1Q13330 715 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 MS4A13Q5J8X5 152 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 ACBD5Q5T8D3 534 aaPredicted RBP25.48■■□□□ 1.67
CDPF1-201ENST00000314567 RWDD4Q6NW29 188 aaKnown RBP25.48■■□□□ 1.67
CDPF1-201ENST00000314567 DENND1CQ8IV53 801 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 ACSS3Q9H6R3 686 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 CHMP2BQ9UQN3 213 aa25.48■■□□□ 1.67
CDPF1-201ENST00000314567 TRAV19A0A0A6YYK7 116 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 CORO1AP31146 461 aaKnown RBP25.47■■□□□ 1.67
CDPF1-201ENST00000314567 RING1Q06587 406 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 RAP1GAP2Q684P5 730 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ANKRD54Q6NXT1 300 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 C3orf62Q6ZUJ4 267 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 CAND1Q86VP6 1230 aaKnown RBP25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ZNF567Q8N184 647 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ARHGEF2Q92974 986 aaKnown RBP25.47■■□□□ 1.67
CDPF1-201ENST00000314567 SEPT10Q9P0V9 454 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 CLEC1BQ9P126 229 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 MRPS23Q9Y3D9 190 aaKnown RBP25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ACTL7BQ9Y614 415 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 TBX10O75333 385 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 MLNP12872 115 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 GUCY1A3Q02108 690 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ADAM15Q13444 863 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 TMEM184AQ6ZMB5 413 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 EXOC3L1Q86VI1 746 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ATP6V0D2Q8N8Y2 350 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 ST13P5Q8NFI4 369 aaPredicted RBP25.47■■□□□ 1.67
CDPF1-201ENST00000314567 RIN3Q8TB24 985 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 BTN2A3PQ96KV6 586 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 DZANK1Q9NVP4 752 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 CTNNAL1Q9UBT7 734 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 RABGEF1Q9UJ41 708 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 TRHDEQ9UKU6 1024 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 VANGL2Q9ULK5 521 aa25.47■■□□□ 1.67
CDPF1-201ENST00000314567 TRDMT1O14717 391 aaKnown RBP25.46■■□□□ 1.67
CDPF1-201ENST00000314567 GSTA2P09210 222 aa25.46■■□□□ 1.67
CDPF1-201ENST00000314567 SSTR1P30872 391 aa25.46■■□□□ 1.67
CDPF1-201ENST00000314567 MLLT6P55198 1093 aaPredicted RBP25.46■■□□□ 1.67
CDPF1-201ENST00000314567 CAPN12Q6ZSI9 719 aa25.46■■□□□ 1.67
CDPF1-201ENST00000314567 TP53INP2Q8IXH6 220 aa25.46■■□□□ 1.67
CDPF1-201ENST00000314567 WASH4PA8MWX3 477 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 E9PAM4 449 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 POU2F2P09086 479 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 PTPN3P26045 913 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 KPNA1P52294 538 aaPredicted RBP25.45■■□□□ 1.67
CDPF1-201ENST00000314567 GEMIN4P57678 1058 aaKnown RBP25.45■■□□□ 1.67
CDPF1-201ENST00000314567 FAM182AQ5T1J6 154 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 SYCP2LQ5T4T6 812 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 NUGGCQ68CJ6 796 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 RFWD3Q6PCD5 774 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 ZNF534Q76KX8 674 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 CENPTQ96BT3 561 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 CLDND1Q9NY35 253 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 DONSONQ9NYP3 566 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 MPP6Q9NZW5 540 aa25.45■■□□□ 1.67
CDPF1-201ENST00000314567 KLHL8Q9P2G9 620 aaPredicted RBP25.45■■□□□ 1.67
CDPF1-201ENST00000314567 AGO1Q9UL18 857 aaKnown RBP25.45■■□□□ 1.67
CDPF1-201ENST00000314567 HELZP42694 1942 aaKnown RBP25.45■■□□□ 1.66
CDPF1-201ENST00000314567 PRAMEF12O95522 483 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 GCAP28676 217 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 SLC6A4P31645 630 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 LSP1P33241 339 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 HARS2P49590 506 aaKnown RBP25.45■■□□□ 1.66
CDPF1-201ENST00000314567 ITPRIPL1Q6GPH6 555 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 CMTM8Q8IZV2 173 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 PLD4Q96BZ4 506 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms