RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CAAP1Q9H8G2 361 aa9.72□□□□□ -0.85
RBFOX1-201ENST00000311745 MRPL47Q9HD33 250 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-201ENST00000311745 VANGL2Q9ULK5 521 aa9.72□□□□□ -0.85
RBFOX1-201ENST00000311745 SLC45A1Q9Y2W3 748 aa9.72□□□□□ -0.85
RBFOX1-201ENST00000311745 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
RBFOX1-201ENST00000311745 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.72□□□□□ -0.85
RBFOX1-201ENST00000311745 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 TRIM64BA6NI03 449 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 PDHXO00330 501 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 GSC2O15499 205 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 CCDC22O60826 627 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 SIN3BO75182 1162 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 SPAG7O75391 227 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 MICAL2O94851 1124 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 ITGB3P05106 788 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 C6orf222P0C671 652 aaPredicted RBP9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 CTRB1P17538 263 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 OSBPP22059 807 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 FAM182AQ5T1J6 154 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 CTRB2Q6GPI1 263 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 NANOGP8Q6NSW7 305 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 CGB2Q6NT52 195 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 SLC51BQ86UW2 128 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 ERI1Q8IV48 349 aaKnown RBP9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 ZBTB8OSQ8IWT0 167 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 PPP1R13LQ8WUF5 828 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 ZNF75CPQ92670 426 aaPredicted RBP9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 BORCS5Q969J3 196 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 MAP6Q96JE9 813 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 C10orf88Q9H8K7 445 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 VPS37BQ9H9H4 285 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 WASH6PQ9NQA3 447 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 NKIRAS1Q9NYS0 192 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 SAE1Q9UBE0 346 aaPredicted RBP9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 BCAP29Q9UHQ4 241 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 PPM1HQ9ULR3 514 aa9.71□□□□□ -0.85
RBFOX1-201ENST00000311745 PATJQ8NI35 1801 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 MEN1O00255 615 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 NOP56O00567 594 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 CIB2O75838 187 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 IL18RAPO95256 599 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 TTC4O95801 387 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 AGTP01019 485 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 MMP3P08254 477 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 RAP1GDS1P52306 607 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 P2RX3P56373 397 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 RNASEH2BQ5TBB1 312 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 LIN9Q5TKA1 542 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 ZNF600Q6ZNG1 722 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 TRMT10CQ7L0Y3 403 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 ZNF598Q86UK7 904 aaKnown RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 RCOR2Q8IZ40 523 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 C7orf31Q8N865 590 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 SPOCK2Q92563 424 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 DHRS9Q9BPW9 319 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 RUBCNLQ9H714 662 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 SLCO1B3Q9NPD5 702 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 FLRT1Q9NZU1 646 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 USP12O75317 370 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 CALB1P05937 261 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 SMIM18P0DKX4 95 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 PRKCAP17252 672 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 CDH2P19022 906 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 HNF1BP35680 557 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 PTPN9P43378 593 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 KRT6CP48668 564 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 SNAPC2Q13487 334 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 DPYSQ14117 519 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 TRIP10Q15642 601 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 PPP6R3Q5H9R7 873 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 CLVS2Q5SYC1 327 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 C1orf146Q5VVC0 180 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 FNIP1Q8TF40 1166 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 ATL1Q8WXF7 558 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 NKD2Q969F2 451 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 TMIGD2Q96BF3 282 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 LPIN3Q9BQK8 851 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 EPB41L1Q9H4G0 881 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 PRMT7Q9NVM4 692 aaPredicted RBP9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 NCKIPSDQ9NZQ3 722 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 PARP2Q9UGN5 583 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 LGALS13Q9UHV8 139 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 USTQ9Y2C2 406 aa9.71□□□□□ -0.86
RBFOX1-201ENST00000311745 NLRC5Q86WI3 1866 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 ASB14A6NK59 587 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 HCRTO43612 131 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 UGT1A9O60656 530 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 EPN2O95208 641 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 BMP10O95393 424 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 EIF2S1P05198 315 aaKnown RBP9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 BRAFP15056 766 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 UGT1A6P19224 532 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 UGT1A1P22309 533 aa9.7□□□□□ -0.86
RBFOX1-201ENST00000311745 UGT1A4P22310 534 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms