RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 MPP3Q13368 585 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 NAB1Q13506 487 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 PCED1BQ96HM7 432 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 SENP8Q96LD8 212 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 VCXQ9H320 206 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 NMRAL1Q9HBL8 299 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 SORCS3Q9UPU3 1222 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 MYL3P08590 195 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 YBX3P16989 372 aaKnown RBP eCLIP25.84■■□□□ 1.73
HOXB3-201ENST00000311626 EPHX2P34913 555 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 C9orf131Q5VYM1 1079 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 VPS39Q96JC1 886 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 MARK4Q96L34 752 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 FBXW11Q9UKB1 542 aa25.84■■□□□ 1.73
HOXB3-201ENST00000311626 XPOTO43592 962 aaKnown RBP25.83■■□□□ 1.73
HOXB3-201ENST00000311626 STRNO43815 780 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 COX4I1P13073 169 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 TBL3Q12788 808 aaKnown RBP25.83■■□□□ 1.73
HOXB3-201ENST00000311626 CCDC153Q494R4 210 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 PAN2Q504Q3 1202 aaKnown RBP25.83■■□□□ 1.73
HOXB3-201ENST00000311626 LDLRAD1Q5T700 205 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 TMCO4Q5TGY1 634 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 SPDYE1Q8NFV5 336 aaPredicted RBP25.83■■□□□ 1.73
HOXB3-201ENST00000311626 MS4A4AQ96JQ5 239 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 LENG8Q96PV6 779 aaPredicted RBP25.83■■□□□ 1.73
HOXB3-201ENST00000311626 TUBGCP5Q96RT8 1024 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 PAAF1Q9BRP4 392 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 SIKE1Q9BRV8 207 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 TKTL2Q9H0I9 626 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 TASP1Q9H6P5 420 aa25.83■■□□□ 1.73
HOXB3-201ENST00000311626 DICER1Q9UPY3 1922 aaKnown RBP25.83■■□□□ 1.72
HOXB3-201ENST00000311626 AIM2O14862 343 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 EPHA3P29320 983 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 SERPINB6P35237 376 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 PPIDQ08752 370 aaKnown RBP25.83■■□□□ 1.72
HOXB3-201ENST00000311626 DBN1Q16643 649 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 SFT2D3Q587I9 215 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 OLFML2BQ68BL8 750 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 KCTD11Q693B1 232 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 IQSEC1Q6DN90 963 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 EPGNQ6UW88 154 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 TOP6BLQ8N6T0 577 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 OR6Y1Q8NGX8 325 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 SIK2Q9H0K1 926 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 OR12D3Q9UGF7 316 aa25.83■■□□□ 1.72
HOXB3-201ENST00000311626 MBLAC1A4D2B0 266 aaPredicted RBP25.82■■□□□ 1.72
HOXB3-201ENST00000311626 F2P00734 622 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 MAGEA12P43365 314 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 KLF10Q13118 480 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 SEMA3BQ13214 749 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 XKR4Q5GH76 650 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 FAM35AQ86V20 835 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 KCTD13Q8WZ19 329 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 SCYL1Q96KG9 808 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 GPAMQ9HCL2 828 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 POMPQ9Y244 141 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 MT-CYBP00156 380 aaPredicted RBP25.82■■□□□ 1.72
HOXB3-201ENST00000311626 ATP5BP06576 529 aaKnown RBP25.82■■□□□ 1.72
HOXB3-201ENST00000311626 PSEN1P49768 467 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 C3orf58Q8NDZ4 430 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 GBA3Q9H227 469 aa25.82■■□□□ 1.72
HOXB3-201ENST00000311626 MAGEA13PA6NCF6 341 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 TRIM13O60858 407 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 LRIG2O94898 1065 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 LYNP07948 512 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 ALOX15P16050 662 aaPredicted RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 PEX2P28328 305 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 CLCNKBP51801 687 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 ATXN3P54252 364 aaPredicted RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 GRB14Q14449 540 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 TMEM198Q66K66 360 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 RWDD4Q6NW29 188 aaKnown RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 ISLR2Q6UXK2 745 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 PNPLA1Q8N8W4 532 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 RNF34Q969K3 372 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 CMTM5Q96DZ9 223 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 TSC22D3Q99576 134 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 COLEC11Q9BWP8 271 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 MIOSQ9NXC5 875 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 CCNT2O60583 730 aaKnown RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 RNASEH1O60930 286 aaKnown RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 FAM219BQ5XKK7 198 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 PGM2L1Q6PCE3 622 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 ZNF467Q7Z7K2 595 aaPredicted RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 CLEC14AQ86T13 490 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 TLK2Q86UE8 772 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 SLC41A1Q8IVJ1 513 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 KCTD4Q8WVF5 259 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 GAD1Q99259 594 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 STN1Q9H668 368 aaKnown RBP25.81■■□□□ 1.72
HOXB3-201ENST00000311626 WDCPQ9H6R7 721 aa25.81■■□□□ 1.72
HOXB3-201ENST00000311626 DFFAO00273 331 aa25.8■■□□□ 1.72
HOXB3-201ENST00000311626 GNAT1P11488 350 aa25.8■■□□□ 1.72
HOXB3-201ENST00000311626 DHDDSQ86SQ9 333 aa25.8■■□□□ 1.72
HOXB3-201ENST00000311626 ACTRT2Q8TDY3 377 aa25.8■■□□□ 1.72
HOXB3-201ENST00000311626 ZNF483Q8TF39 744 aaPredicted RBP25.8■■□□□ 1.72
HOXB3-201ENST00000311626 NUF2Q9BZD4 464 aa25.8■■□□□ 1.72
HOXB3-201ENST00000311626 TSPYL2Q9H2G4 693 aaPredicted RBP25.8■■□□□ 1.72
HOXB3-201ENST00000311626 FLRT1Q9NZU1 646 aa25.8■■□□□ 1.72
HOXB3-201ENST00000311626 GABRDO14764 452 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms