RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FDPSP14324 419 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 ATP6V1C1P21283 382 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ICAM3P32942 547 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CASP5P51878 434 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ITGA1P56199 1179 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CCNJLQ8IV13 435 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 OR7A2PQ8NGA2 310 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 OSGEPQ9NPF4 335 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 RPRD1BQ9NQG5 326 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS41-202ENST00000310301 VAV3Q9UKW4 847 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 SH3GLB1Q9Y371 365 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 HBS1LQ9Y450 684 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 LOC100506127A0A0U1RQW1 187 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 RGS20O76081 388 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 HMBSP08397 361 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 SMPD1P17405 629 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CD52P31358 61 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 MCL1Q07820 350 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 FASTKQ14296 549 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 GOLGA7BQ2TAP0 167 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 DCAF6Q58WW2 860 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 N4BP2L1Q5TBK1 243 aaPredicted RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 TEPSINQ96N21 525 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 NDNQ99608 321 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 NT5C1AQ9BXI3 368 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 NCKIPSDQ9NZQ3 722 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 MAP2K7O14733 419 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 SEC24AO95486 1093 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 POMCP01189 267 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 RPL5P46777 297 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 NR1H2P55055 460 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 GJA9P57773 515 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CCL14Q16627 93 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 UGT3A1Q6NUS8 523 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 SNX32Q86XE0 403 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CCDC33Q8N5R6 958 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 INPP4AQ96PE3 977 aaPredicted RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 GPR20Q99678 358 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 SPATA16Q9BXB7 569 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CATSPERBQ9H7T0 1116 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 THAP1Q9NVV9 213 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ZNF222Q9UK12 451 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ST3GAL5Q9UNP4 418 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 MTSS1O43312 755 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 PMPCBO75439 489 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 KRT36O76013 467 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 FOSL2P15408 326 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 TTKP33981 857 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 RPL21P46778 160 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 PKNOX1P55347 436 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 DDX39BQ13838 428 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 CST9Q5W186 159 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 OVOS1Q6IE37 1185 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 KIAA0408Q6ZU52 694 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 CYP4Z2PQ8N1L4 340 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 APOPT1Q96IL0 206 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 ASB7Q9H672 318 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 GABRQQ9UN88 632 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 DOLKQ9UPQ8 538 aa8.32□□□□□ -1.08
VPS41-202ENST00000310301 RBMX2Q9Y388 322 aaKnown RBP8.32□□□□□ -1.08
VPS41-202ENST00000310301 A0A1W2PQ45 241 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 A0A1W2PQY0 241 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 SYNCRIPO60506 623 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 SERPINE1P05121 402 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ALOX15P16050 662 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 GARTP22102 1010 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 MAPK1P28482 360 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 CCND3P30281 292 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 ITGA9Q13797 1035 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 HPDLQ96IR7 371 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 FUCA2Q9BTY2 467 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 UBXN8O00124 270 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 CYB561D2O14569 222 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 MRASO14807 208 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ANXA9O76027 345 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 ABCB1P08183 1280 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 ANPEPP15144 967 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 SLC11A2P49281 568 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 SMARCB1Q12824 385 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 C2CD6Q53TS8 623 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 AKAP14Q86UN6 197 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 IZUMO1Q8IYV9 350 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 C8orf59Q8N0T1 100 aaPredicted RBP8.31□□□□□ -1.08
VPS41-202ENST00000310301 YIPF2Q9BWQ6 316 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 EPB41L1Q9H4G0 881 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 PDGFCQ9NRA1 345 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
VPS41-202ENST00000310301 TBX20Q9UMR3 447 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms