RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LTBP2Q14767 1821 aa21.69■■□□□ 1.06
ATG4D-201ENST00000309469 GOLGA6L7A0A1B0GV03 622 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 AP3B1O00203 1094 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 FOXN2P32314 431 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 SERPINB9P50453 376 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 NIPAL4Q0D2K0 466 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 RAB33AQ14088 237 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 HECTD3Q5T447 861 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 NADSYN1Q6IA69 706 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 MARK2Q7KZI7 788 aaKnown RBP21.68■■□□□ 1.06
ATG4D-201ENST00000309469 LINC00523Q86TU6 105 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 CACNA2D3Q8IZS8 1091 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.68■■□□□ 1.06
ATG4D-201ENST00000309469 SPATA22Q8NHS9 363 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 CDKL2Q92772 493 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 MTBPQ96DY7 904 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 HMCESQ96FZ2 354 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 MYRFLQ96LU7 910 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 RPRD1AQ96P16 312 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-201ENST00000309469 APOL2Q9BQE5 337 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 NACA2Q9H009 215 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 YIPF1Q9Y548 306 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 RPS6KL1Q9Y6S9 549 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 CARNS1A5YM72 827 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 TM9SF1O15321 606 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 ANXA9O76027 345 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 HLA-DQB2P05538 268 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 URODP06132 367 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 PYGBP11216 843 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 CERCAMQ5T4B2 595 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 HHATQ5VTY9 493 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 CES3Q6UWW8 571 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 NECAB2Q7Z6G3 386 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 TCP10LQ8TDR4 215 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 FATE1Q969F0 183 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 PPP1R2P1Q96PQ5 205 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 ZNF212Q9UDV6 495 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 NUP205Q92621 2012 aa21.68■■□□□ 1.06
ATG4D-201ENST00000309469 MAGEB16A2A368 324 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 GJB5O95377 273 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 PEX11BO96011 259 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 TAC1P20366 129 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 TACR2P21452 398 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 CDH17Q12864 832 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 NAB1Q13506 487 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 KLHDC10Q6PID8 442 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 LVRNQ6Q4G3 990 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 TMEM135Q86UB9 458 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 FCRL3Q96P31 734 aaPredicted RBP21.67■■□□□ 1.06
ATG4D-201ENST00000309469 ELAC2Q9BQ52 826 aaKnown RBP21.67■■□□□ 1.06
ATG4D-201ENST00000309469 IL22Q9GZX6 179 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 FGFR1OP2Q9NVK5 253 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 TRPM5Q9NZQ8 1165 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 GRID1Q9ULK0 1009 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 MYO18AQ92614 2054 aaKnown RBP21.67■■□□□ 1.06
ATG4D-201ENST00000309469 LPXNO60711 386 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 NEBLO76041 1014 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 KIAA0754O94854 1291 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 MT-CYBP00156 380 aaPredicted RBP21.67■■□□□ 1.06
ATG4D-201ENST00000309469 MGAT5Q09328 741 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 HNRNPDQ14103 355 aaKnown RBP21.67■■□□□ 1.06
ATG4D-201ENST00000309469 SEPT7Q16181 437 aaKnown RBP21.67■■□□□ 1.06
ATG4D-201ENST00000309469 TAF12Q16514 161 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 MYEOVQ96EZ4 313 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 APOPT1Q96IL0 206 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 YME1L1Q96TA2 773 aa21.67■■□□□ 1.06
ATG4D-201ENST00000309469 ANKRD65E5RJM6 399 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 COCHO43405 550 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 ATP9BO43861 1147 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 ACSL4O60488 711 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 RFPL1O75677 317 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 BAIAP3O94812 1187 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 TPH1P17752 444 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 DNAJB2P25686 324 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 CNTFP26441 200 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 RENBPP51606 427 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 GEMP55040 296 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 CORO7P57737 925 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 BMPR2Q13873 1038 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 ZNF449Q6P9G9 518 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 C6orf89Q6UWU4 347 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 CIR1Q86X95 450 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-201ENST00000309469 CCDC197Q8NCU1 140 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 AUTS2Q8WXX7 1259 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 CERS2Q96G23 380 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 TRMT2BQ96GJ1 504 aaKnown RBP21.66■■□□□ 1.06
ATG4D-201ENST00000309469 TBL1YQ9BQ87 522 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 PCDH10Q9P2E7 1040 aa21.66■■□□□ 1.06
ATG4D-201ENST00000309469 FAM237BA0A1B0GVD1 139 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 HMX2A2RU54 273 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 F5H5T6 163 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 J3KR12 359 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 MYO1CO00159 1063 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 USP1O94782 785 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 HARS2P49590 506 aaKnown RBP21.65■■□□□ 1.06
ATG4D-201ENST00000309469 NEK3P51956 506 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 FRG1Q14331 258 aaKnown RBP21.65■■□□□ 1.06
ATG4D-201ENST00000309469 VEPH1Q14D04 833 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 PDK4Q16654 411 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 ANKRD20A4Q4UJ75 823 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms