RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 CCDC28AQ8IWP9 274 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ABRAQ8N0Z2 381 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 EMC1Q8N766 993 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 PPM1NQ8N819 430 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 PSMA8Q8TAA3 256 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 KBTBD7Q8WVZ9 684 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 CMTM5Q96DZ9 223 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 DMRTB1Q96MA1 342 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ATP13A3Q9H7F0 1226 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 POLE4Q9NR33 117 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 CYP26B1Q9NR63 512 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 C20orf96Q9NUD7 363 aaPredicted RBP10.66□□□□□ -0.7
MSRB3-201ENST00000308259 AURKCQ9UQB9 309 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 NUMBLQ9Y6R0 609 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 TSC22D2O75157 780 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 NADKO95544 446 aaPredicted RBP10.66□□□□□ -0.7
MSRB3-201ENST00000308259 C4BPAP04003 597 aaKnown RBP10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ZACNQ401N2 412 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 RWDD4Q6NW29 188 aaKnown RBP10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 TMEM26Q6ZUK4 368 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ALLCQ8N6M5 410 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 POC5Q8NA72 575 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 TRPM4Q8TD43 1214 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ACTRT2Q8TDY3 377 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ZNF606Q8WXB4 792 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 SLCO2A1Q92959 643 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 FBXL18Q96ME1 805 aa10.66□□□□□ -0.7
MSRB3-201ENST00000308259 ZNFX1Q9P2E3 1918 aaKnown RBP10.65□□□□□ -0.7
MSRB3-201ENST00000308259 TCRBV7S3A2A0A539 114 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 PABPN1LA6NDY0 278 aaKnown RBP10.65□□□□□ -0.7
MSRB3-201ENST00000308259 TMEM88BA6NKF7 163 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 KRT6AP02538 564 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 KRT6BP04259 564 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 CD48P09326 243 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 SOX11P35716 441 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 ACTR2P61160 394 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 SP2Q02086 613 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 SMAD1Q15797 465 aaKnown RBP10.65□□□□□ -0.7
MSRB3-201ENST00000308259 CRY1Q16526 586 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 FEZF2Q8TBJ5 459 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 SLITRK1Q96PX8 696 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 ST6GALNAC4Q9H4F1 302 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 STN1Q9H668 368 aaKnown RBP10.65□□□□□ -0.7
MSRB3-201ENST00000308259 PRKAG2Q9UGJ0 569 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 SLC8A2Q9UPR5 921 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 PDZK1P1A8MUH7 402 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 EXTL3O43909 919 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 RAP1GAPP47736 663 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 SLC9A3P48764 834 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 ECT2LQ008S8 904 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 STX3Q13277 289 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 TAF5Q15542 800 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 TTC23LQ6PF05 361 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 C3orf62Q6ZUJ4 267 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 CDC26Q8NHZ8 85 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 MTMR12Q9C0I1 747 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 EPB41L1Q9H4G0 881 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 RAD21L1Q9H4I0 556 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 JPH1Q9HDC5 661 aaPredicted RBP10.65□□□□□ -0.7
MSRB3-201ENST00000308259 ANKEF1Q9NU02 776 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 GDAP2Q9NXN4 497 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 STK39Q9UEW8 545 aa10.65□□□□□ -0.7
MSRB3-201ENST00000308259 CENPXA8MT69 81 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 K7ERI5 159 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 KLHL2O95198 593 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 LYPLA2O95372 231 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 OAZ1P54368 228 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 FNBP1LQ5T0N5 605 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 USP43Q70EL4 1123 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 FBXW8Q8N3Y1 598 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 ZCCHC9Q8N567 271 aaKnown RBP10.65□□□□□ -0.71
MSRB3-201ENST00000308259 ISOC1Q96CN7 298 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 ZSCAN5AQ9BUG6 496 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 AVENQ9NQS1 362 aaPredicted RBP10.65□□□□□ -0.71
MSRB3-201ENST00000308259 PARVAQ9NVD7 372 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 NXF1Q9UBU9 619 aaKnown RBP10.65□□□□□ -0.71
MSRB3-201ENST00000308259 RAB26Q9ULW5 256 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 IPPQ9Y573 584 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 CEPT1Q9Y6K0 416 aa10.65□□□□□ -0.71
MSRB3-201ENST00000308259 SAC3D1A6NKF1 404 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 ALOX5P09917 674 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 CD19P15391 556 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 NAMPTP43490 491 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 EMC2Q15006 297 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 MAPRE1Q15691 268 aaKnown RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 CCDC58Q4VC31 144 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 DNAJC24Q6P3W2 148 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 RALGPS2Q86X27 583 aaPredicted RBP10.64□□□□□ -0.71
MSRB3-201ENST00000308259 RHPN2Q8IUC4 686 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 LRRC49Q8IUZ0 686 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 CCDC33Q8N5R6 958 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SLC15A4Q8N697 577 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 PPP1R16BQ96T49 567 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
MSRB3-201ENST00000308259 SENP6Q9GZR1 1112 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms