RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 MANEAQ5SRI9 462 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 OR6B2Q6IFH4 312 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 NEK5Q6P3R8 708 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 Q6ZSR6 202 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 PTAR1Q7Z6K3 402 aaPredicted RBP12.18□□□□□ -0.46
SMIM4-201ENST00000307106 ABI3BPQ7Z7G0 1075 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 PTRH1Q86Y79 214 aaKnown RBP12.18□□□□□ -0.46
SMIM4-201ENST00000307106 WDR48Q8TAF3 677 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 LIN37Q96GY3 246 aaPredicted RBP12.18□□□□□ -0.46
SMIM4-201ENST00000307106 PSMG3-AS1Q96PY0 264 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 BLZF1Q9H2G9 400 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 SYNDIG1Q9H7V2 258 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 MMRN2Q9H8L6 949 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 GEMIN8Q9NWZ8 242 aaKnown RBP12.18□□□□□ -0.46
SMIM4-201ENST00000307106 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 TSPAN16Q9UKR8 245 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 ACSL6Q9UKU0 697 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 PPM1HQ9ULR3 514 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 CSNK1G3Q9Y6M4 447 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 MORC2Q9Y6X9 1032 aaPredicted RBP12.18□□□□□ -0.46
SMIM4-201ENST00000307106 BLACEA4D250 179 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 ENO4A6NNW6 628 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 A6NNZ2 444 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 MUSKO15146 869 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 CSF2P04141 144 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 NR3C1P04150 777 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 LCP1P13796 627 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 NME1P15531 152 aaKnown RBP12.17□□□□□ -0.46
SMIM4-201ENST00000307106 ZNF18P17022 549 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 VAMP7P51809 220 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 CYP4F2P78329 520 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 FOXK1P85037 733 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 SULT2A1Q06520 285 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 PPP3CAQ08209 521 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 BST2Q10589 180 aaKnown RBP12.17□□□□□ -0.46
SMIM4-201ENST00000307106 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
SMIM4-201ENST00000307106 CLCA4Q14CN2 919 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 SLC39A14Q15043 492 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 RABEP1Q15276 862 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 IGFBP7Q16270 282 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 SKIDA1Q1XH10 827 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 DEFB133Q30KQ1 61 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 ACCSLQ4AC99 568 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 PIP5KL1Q5T9C9 394 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 HORMAD1Q86X24 394 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 DCP2Q8IU60 420 aaKnown RBP12.17□□□□□ -0.46
SMIM4-201ENST00000307106 FBXO39Q8N4B4 442 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 FAM26EQ8N5C1 309 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 IQUBQ8NA54 791 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 ZSCAN1Q8NBB4 408 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 FAM174AQ8TBP5 190 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 ZNF564Q8TBZ8 553 aaPredicted RBP12.17□□□□□ -0.46
SMIM4-201ENST00000307106 FCRL2Q96LA5 508 aaPredicted RBP12.17□□□□□ -0.46
SMIM4-201ENST00000307106 USP28Q96RU2 1077 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 IL12RB2Q99665 862 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 CNGB3Q9NQW8 809 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 FRMD4BQ9Y2L6 1034 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
SMIM4-201ENST00000307106 TPP1O14773 563 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 MCF2LO15068 1137 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 ALOX15BO15296 676 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 AQP9O43315 295 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 CD2BP2O95400 341 aaKnown RBP12.16□□□□□ -0.46
SMIM4-201ENST00000307106 MOCS2O96007 188 aaPredicted RBP12.16□□□□□ -0.46
SMIM4-201ENST00000307106 TRIM49P0CI25 452 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 TRIM49CP0CI26 452 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 PDGFRAP16234 1089 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 UGT1A5P35504 534 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 RPIAP49247 311 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 EIF3IQ13347 325 aaKnown RBP12.16□□□□□ -0.46
SMIM4-201ENST00000307106 SLC12A1Q13621 1099 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 FZD2Q14332 565 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 RAB11FIP2Q7L804 512 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 VASH2Q86V25 355 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 PARGQ86W56 976 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 LGI2Q8N0V4 545 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 SCML4Q8N228 414 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 UBA3Q8TBC4 463 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 LMX1AQ8TE12 382 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 HTR3CQ8WXA8 447 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 KCTD13Q8WZ19 329 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 NAT6Q93015 286 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 BMFQ96LC9 184 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 CCDC3Q9BQI4 270 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 EPB41L5Q9HCM4 733 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 GPR27Q9NS67 375 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 KCNK4Q9NYG8 393 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
SMIM4-201ENST00000307106 SPTY2D1-AS1A0A0U1RR47 76 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 PVALEFA0A1B0GWK0 134 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 PIK3R2O00459 728 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 BNIP3LO60238 219 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 PCDH8O95206 1070 aa12.15□□□□□ -0.46
SMIM4-201ENST00000307106 HGFP14210 728 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms