RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ATG16L2Q8NAA4 619 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 CKAP2Q8WWK9 683 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 CERS2Q96G23 380 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ANKRD27Q96NW4 1050 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 SLC25A23Q9BV35 468 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 ADAM28Q9UKQ2 775 aa16.19■□□□□ 0.18
USP42-201ENST00000306177 PIGNO95427 931 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 IL2P60568 153 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 AUHQ13825 339 aaKnown RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 ABHD15Q6UXT9 468 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 FIG4Q92562 907 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 DPF3Q92784 378 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 TMEM237Q96Q45 408 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 FTHL17Q9BXU8 183 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 ARMCX1Q9P291 453 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 FGFR1P11362 822 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 POU1F1P28069 291 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 PLK1P53350 603 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 RPL7AP62424 266 aaKnown RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 FKBP1BP68106 108 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 OASLQ15646 514 aaKnown RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 NOMO2Q5JPE7 1267 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 TCHHL1Q5QJ38 904 aaPredicted RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 SNX32Q86XE0 403 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 GPSM1Q86YR5 675 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 POU5F2Q8N7G0 328 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 HGH1Q9BTY7 390 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 ZYG11BQ9C0D3 744 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 DCXO43602 365 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 SHBGP04278 402 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 NFKB1P19838 968 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 CD86P42081 329 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 SLC34A1Q06495 639 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 CCDC142Q17RM4 750 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 DUPD1Q68J44 220 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 MRPL17Q9NRX2 175 aaKnown RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 PDZK1P1A8MUH7 402 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 FSCN2O14926 492 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 ZBTB14O43829 449 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 CCNB1P14635 433 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 POLR2EP19388 210 aaKnown RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 ME2P23368 584 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 DGKAP23743 735 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 RGMBQ6NW40 437 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 C16orf46Q6P387 395 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 PRRG3Q9BZD7 231 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 OPTCQ9UBM4 332 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 STK39Q9UEW8 545 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 GIT1Q9Y2X7 761 aa16.18■□□□□ 0.18
USP42-201ENST00000306177 TNPO3Q9Y5L0 923 aaKnown RBP16.18■□□□□ 0.18
USP42-201ENST00000306177 SAC3D1A6NKF1 404 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 RGS14O43566 566 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 RPN2P04844 631 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 LTA4HP09960 611 aaKnown RBP16.17■□□□□ 0.18
USP42-201ENST00000306177 CRYMQ14894 314 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 KIAA2013Q8IYS2 634 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 SEPHS2Q99611 448 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 CCDC3Q9BQI4 270 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 BDH2Q9BUT1 245 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 ST3GAL5Q9UNP4 418 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 TYMPP19971 482 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 FRG1Q14331 258 aaKnown RBP16.17■□□□□ 0.18
USP42-201ENST00000306177 SH3BP5LQ7L8J4 393 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 TERB1Q8NA31 727 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 BBS2Q9BXC9 721 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 TRPC4Q9UBN4 977 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 MAP3K13O43283 966 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 CBX6O95503 412 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 ALDH9A1P49189 494 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 TOP6BLQ8N6T0 577 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 PPTC7Q8NI37 304 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 ZNF558Q96NG5 402 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 FAM126AQ9BYI3 521 aaPredicted RBP16.17■□□□□ 0.18
USP42-201ENST00000306177 DERAQ9Y315 318 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 COL1A2P08123 1366 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 C15orf38-AP3S2A0A0A6YYH1 394 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 KPNA3O00505 521 aaPredicted RBP16.17■□□□□ 0.18
USP42-201ENST00000306177 PBX1P40424 430 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 MATKP42679 507 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 CCDC149Q6ZUS6 474 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 ARPINQ7Z6K5 226 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 IRF2BP1Q8IU81 584 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 STAG3L4Q8TBR4 150 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 PRDM12Q9H4Q4 367 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 CCDC167Q9P0B6 97 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 RPS6KB2Q9UBS0 482 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 ZMYM5Q9UJ78 669 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 SNX8Q9Y5X2 465 aa16.17■□□□□ 0.18
USP42-201ENST00000306177 CLPTM1O96005 669 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 GOT1P17174 413 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 CRADDP78560 199 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 MRPS5P82675 430 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 CRY1Q16526 586 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 ZFP1Q6P2D0 407 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 UNC5AQ6ZN44 842 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms