RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TLR6Q9Y2C9 796 aa11.62□□□□□ -0.55
SCG2-201ENST00000305409 PLLPQ9Y342 182 aa11.62□□□□□ -0.55
SCG2-201ENST00000305409 ACTL7AQ9Y615 435 aa11.62□□□□□ -0.55
SCG2-201ENST00000305409 NUMBLQ9Y6R0 609 aa11.62□□□□□ -0.55
SCG2-201ENST00000305409 A0A0G2JND7 137 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 NEBLO76041 1014 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 PAX3P23760 479 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 ALDH7A1P49419 539 aaKnown RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 GPR17Q13304 367 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 ANKRD20A4Q4UJ75 823 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 SPOUT1Q5T280 376 aaKnown RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 ITPRIPL1Q6GPH6 555 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 FBXL22Q6P050 247 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 CRIPAKQ8N1N5 446 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 FBXO22Q8NEZ5 403 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 AUTS2Q8WXX7 1259 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 TRIM62Q9BVG3 475 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 BRD8Q9H0E9 1235 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 ELAC1Q9H777 363 aaKnown RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 C20orf96Q9NUD7 363 aaPredicted RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 TRHDEQ9UKU6 1024 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 ATP11BQ9Y2G3 1177 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 ATXN2Q99700 1313 aaKnown RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 ZCWPW2A0A1B0GU75 182 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 OR6C75A6NL08 312 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 TLR5O60602 858 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 FSBPO95073 299 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 ITGA2BP08514 1039 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 KITP10721 976 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 BEND5Q7L4P6 421 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 STRA8Q7Z7C7 330 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 CDKL2Q92772 493 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 LRRC40Q9H9A6 602 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 NT5MQ9NPB1 228 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 PAK6Q9NQU5 681 aaPredicted RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 IARS2Q9NSE4 1012 aaKnown RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 TXNDC16Q9P2K2 825 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
SCG2-201ENST00000305409 SLC2A6Q9UGQ3 507 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 STARD13Q9Y3M8 1113 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 RAD54BQ9Y620 910 aa11.61□□□□□ -0.55
SCG2-201ENST00000305409 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 GJB5O95377 273 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 DHRS4L1P0CG22 281 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 CCNCP24863 283 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 SLC10A7Q0GE19 358 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 CBLBQ13191 982 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 PDE1CQ14123 709 aaPredicted RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 TBC1D1Q86TI0 1168 aaPredicted RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCG2-201ENST00000305409 PSMG2Q969U7 264 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 ERP27Q96DN0 273 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 TSSK1BQ9BXA7 367 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 MYLK2Q9H1R3 596 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 VPS11Q9H270 941 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 GLOD4Q9HC38 313 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 ACSS2Q9NR19 701 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 CHKBQ9Y259 395 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 MATN3O15232 486 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 GSTA2P09210 222 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 ALADP13716 330 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 KCNA4P22459 653 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 DNAJB2P25686 324 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 HOXC13P31276 330 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 ACVRL1P37023 503 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 MAGEA11P43364 429 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 COG7P83436 770 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 PRPSAP1Q14558 356 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 LACTB2Q53H82 288 aaPredicted RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 KIAA1841Q6NSI8 718 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 MARK2Q7KZI7 788 aaKnown RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 UNKQ9C0B0 810 aaKnown RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 C20orf27Q9GZN8 174 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
SCG2-201ENST00000305409 TLR8Q9NR97 1041 aaKnown RBP11.6□□□□□ -0.55
SCG2-201ENST00000305409 RANBP2P49792 3224 aaKnown RBP11.59□□□□□ -0.55
SCG2-201ENST00000305409 MYO16Q9Y6X6 1858 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 SLC38A8A6NNN8 435 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 FGF10O15520 208 aaPredicted RBP11.59□□□□□ -0.55
SCG2-201ENST00000305409 MTSS1O43312 755 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 TBC1D4O60343 1298 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 SEC24AO95486 1093 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 COL6A1P12109 1028 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 RPL10AP62906 217 aaKnown RBP11.59□□□□□ -0.55
SCG2-201ENST00000305409 TMPRSS15P98073 1019 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 SLC20A2Q08357 652 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 SEPT6Q14141 434 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 IHHQ14623 411 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 ARHGEF6Q15052 776 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
SCG2-201ENST00000305409 NADSYN1Q6IA69 706 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 RGS9BPQ6ZS82 235 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 CHSY1Q86X52 802 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 ZNF683Q8IZ20 524 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 DCLK2Q8N568 766 aa11.59□□□□□ -0.55
SCG2-201ENST00000305409 C10orf82Q8WW14 230 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms