RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MTX3Q5HYI7 312 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 SLC27A1Q6PCB7 646 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 SAPCD2Q86UD0 394 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 TTC30AQ86WT1 665 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 ZNF398Q8TD17 642 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 OR52B2Q96RD2 323 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 S100A14Q9HCY8 104 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 NR4A1P22736 598 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 SLC9B1Q4ZJI4 515 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 FSTL4Q6MZW2 842 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 ARPINQ7Z6K5 226 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 TDRPQ86YL5 185 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 PCYOX1LQ8NBM8 494 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 ESAMQ96AP7 390 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 NXNL1Q96CM4 212 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 OXCT2Q9BYC2 517 aaPredicted RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 SENP6Q9GZR1 1112 aaPredicted RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 MID1IP1Q9NPA3 183 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 CHRNA4P43681 627 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 PRKAA1Q13131 559 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 ATP1A4Q13733 1029 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 GRM3Q14832 879 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 TBCCQ15814 346 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 PFKFB4Q16877 469 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 PSTKQ8IV42 348 aaKnown RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 B3GALNT2Q8NCR0 500 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 WNT8BQ93098 351 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 CPNE1Q99829 537 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 PAIP1Q9H074 479 aaKnown RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 ABCG8Q9H221 673 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 SEMA4BQ9NPR2 832 aaPredicted RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 SIX4Q9UIU6 781 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 POMPQ9Y244 141 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 B4GALT4O60513 344 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 TIPRLO75663 272 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 OR6B1O95007 311 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 GUCA1CO95843 209 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 DLDP09622 509 aaKnown RBP13.52□□□□□ -0.24
CASC4-201ENST00000299957 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.24
CASC4-201ENST00000299957 GABRB2P47870 512 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 CD151P48509 253 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 ROR2Q01974 943 aaKnown RBP13.52□□□□□ -0.24
CASC4-201ENST00000299957 AGAP9Q5VTM2 703 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 SYPL2Q5VXT5 272 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 FRMD7Q6ZUT3 714 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 ARHGEF4Q9NR80 690 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 MYO7AQ13402 2215 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.24
CASC4-201ENST00000299957 KCNU1A8MYU2 1149 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 PTGES3LE9PB15 166 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 HDAC3O15379 428 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 SCNN1BP51168 640 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 SCNN1GP51170 649 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.25
CASC4-201ENST00000299957 NFYCQ13952 458 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 GRTP1Q5TC63 336 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 NEPROQ6NW34 567 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
CASC4-201ENST00000299957 RHOBTB2Q9BYZ6 727 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 CACNA1SQ13698 1873 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 MOXD2PA6NHM9 499 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 LINGO3P0C6S8 592 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 RPS12P25398 132 aaKnown RBP13.52□□□□□ -0.25
CASC4-201ENST00000299957 THPOP40225 353 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 CHN2P52757 468 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 WASHC5Q12768 1159 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 DDX39BQ13838 428 aaKnown RBP13.52□□□□□ -0.25
CASC4-201ENST00000299957 GTF2H3Q13889 308 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 MAPRE2Q15555 327 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 ZNF280DQ6N043 979 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 SZRD1Q7Z422 152 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 ARHGAP22Q7Z5H3 698 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 ZNF670Q9BS34 389 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 NFASCO94856 1347 aa13.52□□□□□ -0.25
CASC4-201ENST00000299957 TCEA3O75764 348 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 TFEBP19484 476 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 LRPAP1P30533 357 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 IDH3AP50213 366 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 DAB2P98082 770 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 INPP5AQ14642 412 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 LCLAT1Q6UWP7 414 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 ZNF483Q8TF39 744 aaPredicted RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 LRRC39Q96DD0 335 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 TBCDQ9BTW9 1192 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 LHX5Q9H2C1 402 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 POPDC2Q9HBU9 364 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 TEX264Q9Y6I9 313 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms