RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SLC34A1Q06495 639 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GALNT3Q14435 633 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 C16orf62Q7Z3J2 963 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DENND1CQ8IV53 801 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ACSS2Q9NR19 701 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FBXL21Q9UKT6 434 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MAGEB16A2A368 324 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RECQL4O94761 1208 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OR6A2O95222 327 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LDLRP01130 860 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FCGR1AP12314 374 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RAD23AP54725 363 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC25A3Q00325 362 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TAF13Q15543 124 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ELMO1Q92556 727 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADAM2Q99965 735 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PEX11AO75192 247 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FKBP6O75344 327 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SASH3O75995 380 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MTA2O94776 668 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OR6B1O95007 311 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PAICSP22234 425 aaKnown RBP13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PPP1R26Q5T8A7 1209 aaPredicted RBP13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DNERQ8NFT8 737 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OPTCQ9UBM4 332 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GPSM3Q9Y4H4 160 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CLDN5O00501 218 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SRP54P61011 504 aaKnown RBP13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMEM119Q4V9L6 283 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 WDR59Q6PJI9 974 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DSG4Q86SJ6 1040 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMPRSS6Q8IU80 811 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF276Q8N554 614 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GPR156Q8NFN8 814 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EXOC2Q96KP1 924 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BTBD9Q96Q07 612 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NAT9Q9BTE0 207 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TM6SF2Q9BZW4 377 aa13.77□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RGS14O43566 566 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 POLR2EP19388 210 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IGFBP4P22692 258 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PTSQ03393 145 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TSNQ15631 228 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FAM84AQ96KN4 292 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BDH2Q9BUT1 245 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SALL1Q9NSC2 1324 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PABPC1P11940 636 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CTPS1P17812 591 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HPCAL1P37235 193 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 INSCQ1MX18 579 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TTMPQ5BVD1 217 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ARMC12Q5T9G4 340 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZNF605Q86T29 641 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MCOLN3Q8TDD5 553 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GANQ9H2C0 597 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 AHSPQ9NZD4 102 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 STK39Q9UEW8 545 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SMIM31A0A1B0GVY4 71 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NCAM2O15394 837 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MAXP61244 160 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CDK16Q00536 496 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FSCN1Q16658 493 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SERPINB11Q96P15 392 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZNHIT2Q9UHR6 403 aa13.77□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KDELR1P24390 212 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 S100A3P33764 101 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 COQ7Q99807 217 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZBTB14O43829 449 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KCNH1O95259 989 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MYL12AP19105 171 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TSHZ1Q6ZSZ6 1077 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FAM20CQ8IXL6 584 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 POLR1BQ9H9Y6 1135 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 THG1LQ9NWX6 298 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SOHLH2Q9NX45 425 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PTPN3P26045 913 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CHKAP35790 457 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RALGDSQ12967 914 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 VTI1BQ9UEU0 232 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 A0A087X1B8 175 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 A0A0B4J269 797 aa13.76□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CCDC166P0CW27 439 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms