RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ATXN3P54252 364 aaPredicted RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 CAP1Q01518 475 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 SLC39A12Q504Y0 691 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 MFSD14CQ5VZR4 134 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 RNF43Q68DV7 783 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 IRGCQ6NXR0 463 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 METTL23Q86XA0 190 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 ZNF280BQ86YH2 543 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 CDKL2Q92772 493 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 FAM136AQ96C01 138 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 THTPAQ9BU02 230 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 CENPOQ9BU64 300 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 NMUR2Q9GZQ4 415 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 TRPV6Q9H1D0 765 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 SLC38A7Q9NVC3 462 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 KANSL3Q9P2N6 904 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 FIS1Q9Y3D6 152 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 ZNF638Q14966 1978 aaKnown RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 SHROOM3Q8TF72 1996 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 TMEM221A6NGB7 291 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 MANSC4A6NHS7 340 aaPredicted RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 TM9SF1O15321 606 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 DUSP11O75319 330 aaKnown RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 TBX18O95935 607 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 SLC4A1P02730 911 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 ACADSP16219 412 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 PTPN3P26045 913 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 PTPN4P29074 926 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 NR2C2P49116 596 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 EPHB1P54762 984 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 USP46P62068 366 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 FKBP1BP68106 108 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 PLOD1Q02809 727 aaPredicted RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 ARL13BQ3SXY8 428 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 VWA5B1Q5TIE3 1220 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 OR52E8Q6IFG1 317 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 C4orf50Q6ZRC1 276 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 STRA8Q7Z7C7 330 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 KBTBD2Q8IY47 623 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 FCRL3Q96P31 734 aaPredicted RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 EBF4Q9BQW3 602 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 DHRS4Q9BTZ2 278 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 C11orf84Q9BUA3 381 aaPredicted RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 XAB2Q9HCS7 855 aaKnown RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 IARS2Q9NSE4 1012 aaKnown RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 C20orf96Q9NUD7 363 aaPredicted RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 FNDC3AQ9Y2H6 1198 aaKnown RBP10.31□□□□□ -0.76
FOXN4-201ENST00000299162 PCDHA11Q9Y5I1 949 aa10.31□□□□□ -0.76
FOXN4-201ENST00000299162 MEI4A8MW99 385 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 CCL22O00626 93 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 OR6B1O95007 311 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ATP6V1B1P15313 513 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 LHX1P48742 406 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 MAXP61244 160 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 FASTKD1Q53R41 847 aaKnown RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 BTBD8Q5XKL5 378 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 CLNKQ7Z7G1 428 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ACVR1CQ8NER5 493 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 SGF29Q96ES7 293 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 SMARCD1Q96GM5 515 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 HIC2Q96JB3 615 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 CYP4F11Q9HBI6 524 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 VANGL2Q9ULK5 521 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 SLC27A5Q9Y2P5 690 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 PLLPQ9Y342 182 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 B2RBV5 119 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 PHGDHO43175 533 aaKnown RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ITM2AO43736 263 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 B4GALT3O60512 393 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ALOX15P16050 662 aaPredicted RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 PCSK1P29120 753 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 PEX6Q13608 980 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ZNF460Q14592 562 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 CNPY1Q3B7I2 92 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 C1orf146Q5VVC0 180 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 SPATA2LQ8IUW3 424 aaPredicted RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 TTC9BQ8N6N2 239 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ATP2A3Q93084 1043 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 ALKBH8Q96BT7 664 aaKnown RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 CLIP3Q96DZ5 547 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 OXNAD1Q96HP4 312 aaPredicted RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 WDR6Q9NNW5 1121 aaKnown RBP10.3□□□□□ -0.76
FOXN4-201ENST00000299162 MAN1C1Q9NR34 630 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 PACSIN3Q9UKS6 424 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 SLC39A10Q9ULF5 831 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 USP3Q9Y6I4 520 aa10.3□□□□□ -0.76
FOXN4-201ENST00000299162 MAGEA13PA6NCF6 341 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 GPR182O15218 404 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 DGKIO75912 1065 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 PSMG1O95456 288 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ODC1P11926 461 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 ETFBP38117 255 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 IRF9Q00978 393 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SLC34A1Q06495 639 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 CBX3Q13185 183 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 SEMA5AQ13591 1074 aa10.29□□□□□ -0.76
FOXN4-201ENST00000299162 UBAP2LQ14157 1087 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms