RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 RNF148Q8N7C7 305 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 MARK4Q96L34 752 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 GTSE1Q9NYZ3 720 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 IPO11Q9UI26 975 aaKnown RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 CRYL1Q9Y2S2 319 aa9.49□□□□□ -0.89
PRDM9-201ENST00000296682 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.49□□□□□ -0.89
PRDM9-201ENST00000296682 A0A0U1RQF3 1178 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 UBA6A0AVT1 1052 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 TBKBP1A7MCY6 615 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PGAM1P18669 254 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 HOXC8P31273 242 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 MSX2P35548 267 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 MAP2K2P36507 400 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 ACLYP53396 1101 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 CCDC15Q0P6D6 951 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 XRCC4Q13426 336 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PCBP1Q15365 356 aaKnown RBP eCLIP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 TEX44Q53QW1 395 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 ESRP1Q6NXG1 681 aaKnown RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PRSS55Q6UWB4 352 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 CLNKQ7Z7G1 428 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SDCCAG8Q86SQ7 713 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SERINC5Q86VE9 423 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SLC41A1Q8IVJ1 513 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PCSK9Q8NBP7 692 aaKnown RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SREK1Q8WXA9 508 aaKnown RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SLC39A8Q9C0K1 460 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SARS2Q9NP81 518 aaKnown RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 CEP290O15078 2479 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 CFAP73A6NFT4 308 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SKAP2O75563 359 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 RFPL1O75677 317 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 ALDH2P05091 517 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 RALBP11234 206 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 CPA3P15088 417 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SLC1A6P48664 564 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PRAMEP78395 509 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 ADAM17P78536 824 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 MPP1Q00013 466 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 TAF10Q12962 218 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PDE1CQ14123 709 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PTPRCAPQ14761 206 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PDCD2Q16342 344 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SWT1Q5T5J6 900 aaKnown RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 ZNF470Q6ECI4 717 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PLD6Q8N2A8 252 aaKnown RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 ZNF276Q8N554 614 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 EFHBQ8N7U6 833 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 N4BP2L2Q92802 583 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 RMDN1Q96DB5 314 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 PHF21BQ96EK2 531 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SENP6Q9GZR1 1112 aaPredicted RBP9.48□□□□□ -0.89
PRDM9-201ENST00000296682 TRPC7Q9HCX4 862 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 SLC2A6Q9UGQ3 507 aa9.48□□□□□ -0.89
PRDM9-201ENST00000296682 GP5P40197 560 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 CD86P42081 329 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 NAGLUP54802 743 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 TBX4P57082 545 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 CSHL1Q14406 222 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 ANKRD20A4Q4UJ75 823 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 SH2D5Q6ZV89 423 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 RPS27LQ71UM5 84 aaKnown RBP9.47□□□□□ -0.89
PRDM9-201ENST00000296682 ACVR1CQ8NER5 493 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 OXNAD1Q96HP4 312 aaPredicted RBP9.47□□□□□ -0.89
PRDM9-201ENST00000296682 NSL1Q96IY1 281 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 SNX15Q9NRS6 342 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 A8MX80 341 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 CNTN5O94779 1100 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 TCN1P20061 433 aaPredicted RBP9.47□□□□□ -0.89
PRDM9-201ENST00000296682 LRPAP1P30533 357 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 OR1E1P30953 314 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 SERPINB5P36952 375 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 SERPINB9P50453 376 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 SEMA5AQ13591 1074 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 C6orf163Q5TEZ5 329 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 NAPEPLDQ6IQ20 393 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 FSTL4Q6MZW2 842 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 LRRC8BQ6P9F7 803 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 ISLR2Q6UXK2 745 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 ZNF534Q76KX8 674 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 C16orf59Q7L2K0 433 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 MICAL1Q8TDZ2 1067 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 KCTD4Q8WVF5 259 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 C10orf82Q8WW14 230 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 WDR6Q9NNW5 1121 aaKnown RBP9.47□□□□□ -0.89
PRDM9-201ENST00000296682 PNPLA8Q9NP80 782 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 CYLDQ9NQC7 956 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 PRR5-ARHGAP8B1AHC4 643 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 TK2O00142 265 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 AIM2O14862 343 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 B4GALT3O60512 393 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 C2P06681 752 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 SLC8A1P32418 973 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 RPL9P32969 192 aaKnown RBP9.47□□□□□ -0.89
PRDM9-201ENST00000296682 PAPOLAP51003 745 aaKnown RBP9.47□□□□□ -0.89
PRDM9-201ENST00000296682 INHBEP58166 350 aa9.47□□□□□ -0.89
PRDM9-201ENST00000296682 ARHGAP8P85298 464 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms