RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TAS2R14Q9NYV8 317 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 VTI1BQ9UEU0 232 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 SH3GLB1Q9Y371 365 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 KCNK1O00180 336 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ME2P23368 584 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 PRR23CQ6ZRP0 262 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 FAM43BQ6ZT52 329 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 SLITRK2Q9H156 845 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 TMEM138Q9NPI0 162 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 ACSS2Q9NR19 701 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 CLEC4AQ9UMR7 237 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 EARS2Q5JPH6 523 aaKnown RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 PPP1R26Q5T8A7 1209 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 KIAA0408Q6ZU52 694 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 OR56A4Q8NGH8 313 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 MBOAT7Q96N66 472 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 C9orf16Q9BUW7 83 aa16.37■□□□□ 0.21
SSRP1-202ENST00000293880 MMADHCQ9H3L0 296 aaPredicted RBP16.37■□□□□ 0.21
SSRP1-202ENST00000293880 RNF17Q9BXT8 1623 aaKnown RBP16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PLOD3O60568 738 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 NEK3P51956 506 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 CBWD6Q4V339 395 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 TRAPPC12Q8WVT3 735 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 FFAR3O14843 346 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 GPR42O15529 346 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 EPORP19235 508 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 IDH2P48735 452 aaKnown RBP16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PFKFB4Q16877 469 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 OLFML2AQ68BL7 652 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ULK3Q6PHR2 472 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 LGI2Q8N0V4 545 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 DEFB129Q9H1M3 183 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ZDHHC6Q9H6R6 413 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ZNF224Q9NZL3 707 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ANKRD6Q9Y2G4 727 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PRLRP16471 622 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 RBL1P28749 1068 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 HPCAL1P37235 193 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 KCNJ2P63252 427 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 HHIPL2Q6UWX4 724 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 DNAJB14Q8TBM8 379 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 COL26A1Q96A83 441 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 SLC4A5Q9BY07 1137 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PCDHA11Q9Y5I1 949 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 CCDC182A6NF36 153 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ENTPD3O75355 529 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PIGNO95427 931 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 GPR107Q5VW38 600 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ZNF34Q8IZ26 560 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 ABRAQ8N0Z2 381 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 SUN5Q8TC36 379 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 CENPIQ92674 756 aaPredicted RBP16.36■□□□□ 0.21
SSRP1-202ENST00000293880 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 CCDC162PA2VCL2 907 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PDK3Q15120 406 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 SPATA20Q8TB22 786 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 CLIP3Q96DZ5 547 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 PLA2G4CQ9UP65 541 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 LRCH1Q9Y2L9 728 aa16.36■□□□□ 0.21
SSRP1-202ENST00000293880 SLC25A27O95847 323 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 GPR15P49685 360 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 DLG4P78352 724 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 EPS8Q12929 822 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 MARC1Q5VT66 337 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 ZDHHC13Q8IUH4 622 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 FAM20CQ8IXL6 584 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 IQCF2Q8IXL9 164 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 PROX1Q92786 737 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 OMDQ99983 421 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 NTRK1P04629 796 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 THP07101 528 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 CHKAP35790 457 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 NDUFAF6Q330K2 333 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 MOSPD2Q8NHP6 518 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 KLHL28Q9NXS3 571 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 FZD1Q9UP38 647 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 A0A087X0B3 334 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 C2orf71A6NGG8 1288 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 RGS14O43566 566 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 EPN2O95208 641 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 NTSR2O95665 410 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 CRABP2P29373 138 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 TBX4P57082 545 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 EXOC3L1Q86VI1 746 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 NUAK2Q9H093 628 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 NMRAL1Q9HBL8 299 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 TECPR2O15040 1411 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 A0A087X1B8 175 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 TFECO14948 347 aaPredicted RBP16.35■□□□□ 0.21
SSRP1-202ENST00000293880 PSMB4P28070 264 aa16.35■□□□□ 0.21
SSRP1-202ENST00000293880 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
SSRP1-202ENST00000293880 CDH17Q12864 832 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms