RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ZNF786Q8N393 782 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FAM162AQ96A26 154 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CERS2Q96G23 380 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PCED1BQ96HM7 432 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MAGED4Q96JG8 741 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TBCDQ9BTW9 1192 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TRPV2Q9Y5S1 764 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TNRC6CQ9HCJ0 1690 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 A0A1W2PQ67 120 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FFAR3O14843 346 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 GPR42O15529 346 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RASSF9O75901 435 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 NUDT17P0C025 328 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MZF1P28698 734 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 GP5P40197 560 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 DAB2P98082 770 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 IRF9Q00978 393 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SREBF2Q12772 1141 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 BOP1Q14137 746 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 RHBDF2Q6PJF5 856 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 C16orf89Q6UX73 402 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 USP50Q70EL3 339 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 TMC7Q7Z402 723 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ZNF467Q7Z7K2 595 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 ZDHHC18Q9NUE0 388 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MARCH2Q9P0N8 246 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 C2orf81A6NN90 581 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 BTN3A1O00481 513 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MSCO60682 206 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PRKCGP05129 697 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ITGA2BP08514 1039 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PRKAR2AP13861 404 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 IL10P22301 178 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MAP4P27816 1152 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 SOAT1P35610 550 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 SLC11A2P49281 568 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 RHOAP61586 193 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 UTS2BQ765I0 119 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NAT16Q8N8M0 369 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 TSPAN17Q96FV3 270 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MAML3Q96JK9 1138 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NPAS2Q99743 824 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 HERPUD2Q9BSE4 406 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NMUR2Q9GZQ4 415 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 DRC3Q9H069 523 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 VPS33BQ9H267 617 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ATP13A1Q9HD20 1204 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 TRIM17Q9Y577 477 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PAGE1O75459 146 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 RGS20O76081 388 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 METTL18O95568 372 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 LRG1P02750 347 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MPSTP25325 297 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 YWHAQP27348 245 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PPARGP37231 505 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 MRPS5P82675 430 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 CDH17Q12864 832 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ACAP1Q15027 740 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 C1orf220Q5T0J3 134 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CRELD2Q6UXH1 353 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 LRRC74BQ6ZQY2 392 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 BBS12Q6ZW61 710 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PSTKQ8IV42 348 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 FAM156AQ8NDB6 213 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NAF1Q96HR8 494 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 ZMAT2Q96NC0 199 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 SNX15Q9NRS6 342 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 THAP1Q9NVV9 213 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 C15orf41Q9Y2V0 281 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 DTNAQ9Y4J8 743 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 LAMB1P07942 1786 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 YJEFN3A6XGL0 299 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 E7ENQ6 273 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 TIMM44O43615 452 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ETS2P15036 469 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CD151P48509 253 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NCALDP61601 193 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 RAD51Q06609 339 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CRYMQ14894 314 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 FAM35AQ86V20 835 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 GSTCDQ8NEC7 633 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PCDH19Q8TAB3 1148 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ESAMQ96AP7 390 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 C1orf50Q9BV19 199 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 TLR8Q9NR97 1041 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 STX18Q9P2W9 335 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 RABGEF1Q9UJ41 708 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ARL5CA6NH57 179 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CHADO15335 359 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 B4GALT4O60513 344 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 LYPLA2O95372 231 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CPSF4O95639 269 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 STAU1O95793 577 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 MT-ND1P03886 318 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MATKP42679 507 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CHRNA4P43681 627 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PTDSS1P48651 473 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 NR2C2P49116 596 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms