RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ASMTLO95671 621 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 INHBAP08476 426 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 NFKB1P19838 968 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 TBX4P57082 545 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 EFEMP1Q12805 493 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 SF3A3Q12874 501 aaKnown RBP eCLIP21.42■■□□□ 1.02
YBX3-202ENST00000279550 PLD1Q13393 1074 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 TAF12Q16514 161 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 CTAGE3PQ8IX95 158 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 UNC5BQ8IZJ1 945 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 PDZD8Q8NEN9 1154 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 GSDMBQ8TAX9 411 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 ARNTL2Q8WYA1 636 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 OVCA2Q8WZ82 227 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 PSMG2Q969U7 264 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 SERAC1Q96JX3 654 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.42■■□□□ 1.02
YBX3-202ENST00000279550 SYBUQ9NX95 663 aa21.42■■□□□ 1.02
YBX3-202ENST00000279550 TNRC18O15417 2968 aaPredicted RBP21.42■■□□□ 1.02
YBX3-202ENST00000279550 FAM159BA6NKW6 160 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 GOLGA8RI6L899 631 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 MTSS1O43312 755 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 ZNF189O75820 626 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 JCHAINP01591 159 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 C8AP07357 584 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 TUBP50607 506 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 SLC18A1P54219 525 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 TEX44Q53QW1 395 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 C6orf89Q6UWU4 347 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 DNAJB7Q7Z6W7 309 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 SRLQ86TD4 932 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 SLC26A11Q86WA9 606 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 USP33Q8TEY7 942 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 SGSM3Q96HU1 749 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 ZNF512Q96ME7 567 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 SLC39A8Q9C0K1 460 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 SLC28A3Q9HAS3 691 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 SSU72Q9NP77 194 aaKnown RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 MPP6Q9NZW5 540 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 SDR42E2A6NKP2 422 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 FGF10O15520 208 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 USP12O75317 370 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 CA4P22748 312 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 HTR7P34969 479 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 MLLT6P55198 1093 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 COG7P83436 770 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 NRG1Q02297 640 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 PIGWQ7Z7B1 504 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 ZNF683Q8IZ20 524 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 CNTD1Q8N815 330 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 OR52K1Q8NGK4 314 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 OXNAD1Q96HP4 312 aaPredicted RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 TSGA13Q96PP4 275 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 PAIP2Q9BPZ3 127 aaKnown RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 C12orf65Q9H3J6 166 aaKnown RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 OLA1Q9NTK5 396 aaKnown RBP21.41■■□□□ 1.02
YBX3-202ENST00000279550 TRHDEQ9UKU6 1024 aa21.41■■□□□ 1.02
YBX3-202ENST00000279550 IQANK1A0A1B0GTG1 560 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 SUN1O94901 812 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 AP2A1O95782 977 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 LRG1P02750 347 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 MT-ND3P03897 115 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 GKAP1Q5VSY0 366 aaPredicted RBP21.4■■□□□ 1.02
YBX3-202ENST00000279550 SNX30Q5VWJ9 437 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 AFMIDQ63HM1 303 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 KCTD11Q693B1 232 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 ITIH5Q86UX2 942 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 LRRC6Q86X45 466 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 CACNA2D3Q8IZS8 1091 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 BANPQ8N9N5 519 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 ZNF419Q96HQ0 510 aaPredicted RBP21.4■■□□□ 1.02
YBX3-202ENST00000279550 TEKT5Q96M29 485 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 MAGEB18Q96M61 343 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 ELAC2Q9BQ52 826 aaKnown RBP21.4■■□□□ 1.02
YBX3-202ENST00000279550 CATSPERBQ9H7T0 1116 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 FGFR1OP2Q9NVK5 253 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 UXTQ9UBK9 157 aaPredicted RBP21.4■■□□□ 1.02
YBX3-202ENST00000279550 ASB3Q9Y575 518 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 IKBKGQ9Y6K9 419 aa21.4■■□□□ 1.02
YBX3-202ENST00000279550 NYNRINQ9P2P1 1898 aaKnown RBP21.39■■□□□ 1.01
YBX3-202ENST00000279550 TLR5O60602 858 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 C1RP00736 705 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 TAC1P20366 129 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 CASC4Q6P4E1 433 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 SH2D5Q6ZV89 423 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 RTL3Q8N8U3 475 aaKnown RBP21.39■■□□□ 1.01
YBX3-202ENST00000279550 MOCS1Q9NZB8 636 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 SLC17A6Q9P2U8 582 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 GGA2Q9UJY4 613 aa21.39■■□□□ 1.01
YBX3-202ENST00000279550 ZNF840PA6NDX5 716 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 TRIM49D1C9J1S8 452 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 IL9RQ01113 521 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 TRIP4Q15650 581 aaPredicted RBP21.38■■□□□ 1.01
YBX3-202ENST00000279550 ZKSCAN8Q15776 578 aaPredicted RBP21.38■■□□□ 1.01
YBX3-202ENST00000279550 C10orf120Q5SQS8 335 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 OTOP3Q7RTS5 596 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 MIB1Q86YT6 1006 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 ATPAF2Q8N5M1 289 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 C1orf74Q96LT6 269 aa21.38■■□□□ 1.01
YBX3-202ENST00000279550 NOL6Q9H6R4 1146 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms