RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 NDNQ99608 321 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 SMPDL3BQ92485 455 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 MARCH2Q9P0N8 246 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 DDX3XO00571 662 aaKnown RBP eCLIP20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 HNMTP50135 292 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 WSCD1Q658N2 575 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 TXNRD3Q86VQ6 643 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 OSCP1Q8WVF1 389 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 ZBTB10Q96DT7 871 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 MRPS35P82673 323 aaKnown RBP20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 KCNMA1Q12791 1236 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 SOCS4Q8WXH5 440 aa20.64■□□□□ 0.89
CACNA1B-201ENST00000277549 POLR2LP62875 67 aaKnown RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 SLC27A1Q6PCB7 646 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 DEFB107AQ8IZN7 70 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 FAM98AQ8NCA5 519 aaKnown RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 SERPINB11Q96P15 392 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 NKRFO15226 690 aaKnown RBP eCLIP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 SLC22A9Q8IVM8 553 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 DAW1Q8N136 415 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 TAS2R13Q9NYV9 303 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 CD3EAPO15446 510 aaKnown RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 LRRC6Q86X45 466 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 FBXO6Q9NRD1 293 aaPredicted RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 BARX2Q9UMQ3 279 aaPredicted RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 EPN2O95208 641 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 PIK3R1P27986 724 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ZC3H12AQ5D1E8 599 aaKnown RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ZBTB49Q6ZSB9 765 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 OTOP2Q7RTS6 562 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 CLEC4MQ9H2X3 399 aaPredicted RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ALG9Q9H6U8 611 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 C1QTNF3-AMACRE9PGA6 284 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 FOXM1Q08050 763 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ARHGEF19Q8IW93 802 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ULBP1Q9BZM6 244 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 PLK2Q9NYY3 685 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 OGDHLQ9ULD0 1010 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ZNF232Q9UNY5 417 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 CENPXA8MT69 81 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 RPL9P32969 192 aaKnown RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 NR1I3Q14994 352 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 TARBP2Q15633 366 aaKnown RBP20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 ZNF605Q86T29 641 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 OR56A4Q8NGH8 313 aa20.63■□□□□ 0.89
CACNA1B-201ENST00000277549 HK2P52789 917 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 SKP1P63208 163 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 ATP8B4Q8TF62 1192 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 RGS14O43566 566 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 FKTNO75072 461 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 GIT2Q14161 759 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 PFKFB4Q16877 469 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 OLFML2AQ68BL7 652 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 PGBD2Q6P3X8 592 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 FBXO33Q7Z6M2 555 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 CD248Q9HCU0 757 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 TMEM138Q9NPI0 162 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 NDUFAF1Q9Y375 327 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 PHGDHO43175 533 aaKnown RBP20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 GYPCP04921 128 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 RASA2Q15283 850 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 GALNTL5Q7Z4T8 443 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 DDHD1Q8NEL9 900 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 IDI2Q9BXS1 227 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 RARGP13631 454 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 ELNP15502 786 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 HTR1BP28222 390 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 ATP5C1P36542 298 aaKnown RBP20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 RGS1Q08116 209 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 GRB14Q14449 540 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 FAM126BQ8IXS8 530 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 NCKIPSDQ9NZQ3 722 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 LOC100506127A0A0U1RQW1 187 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 LSP1P33241 339 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 CEBPGP53567 150 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 ANTXR2P58335 489 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 CCNI2Q6ZMN8 369 aaPredicted RBP20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 DGCR6LQ9BY27 220 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 TLE6Q9H808 572 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 VIPAS39Q9H9C1 493 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 TUFMP49411 452 aaKnown RBP20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 XRRA1Q6P2D8 792 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 MAGEC3Q8TD91 643 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 DAPK2Q9UIK4 370 aa20.62■□□□□ 0.89
CACNA1B-201ENST00000277549 EIF3HO15372 352 aaKnown RBP eCLIP20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 MPOP05164 745 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 XKR6Q5GH73 641 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 BIRC5O15392 142 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 FOXP2O15409 715 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 SNRPFP62306 86 aaKnown RBP20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 OR52L1Q8NGH7 329 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 ARNTL2Q8WYA1 636 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 MAML3Q96JK9 1138 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 DNMT3LQ9UJW3 386 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 BTRCQ9Y297 605 aa20.61■□□□□ 0.89
CACNA1B-201ENST00000277549 EFCAB10A6NFE3 127 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms