RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 COPAP53621 1224 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
C9orf3-201ENST00000277198 MRPS6P82932 125 aaKnown RBP13.19□□□□□ -0.3
C9orf3-201ENST00000277198 MXRA7P84157 204 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 DEUP1Q05D60 604 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 BTKQ06187 659 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 CLEC4CQ8WTT0 213 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 SREK1Q8WXA9 508 aaKnown RBP13.19□□□□□ -0.3
C9orf3-201ENST00000277198 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 CERS2Q96G23 380 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 LGMNQ99538 433 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 HNRNPABQ99729 332 aaKnown RBP13.19□□□□□ -0.3
C9orf3-201ENST00000277198 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 APOL6Q9BWW8 343 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 DPEP3Q9H4B8 488 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 PDP2Q9P2J9 529 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 ASB3Q9Y575 518 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 SPTBN5Q9NRC6 3674 aaKnown RBP13.19□□□□□ -0.3
C9orf3-201ENST00000277198 A0A088AWK7 358 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 AP3B1O00203 1094 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 MTSS1O43312 755 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 MFSD11O43934 449 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SIN3BO75182 1162 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 MPOP05164 745 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 FESP07332 822 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SP100P23497 879 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 ADORA2BP29275 332 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 TYK2P29597 1187 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SPRP35270 261 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SULT1E1P49888 294 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 ZNF135P52742 658 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 ABCE1P61221 599 aaKnown RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 RPL10AP62906 217 aaKnown RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 XIAPP98170 497 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 DSG1Q02413 1049 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 FBXO27Q8NI29 283 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 STON2Q8WXE9 905 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 ZNF778Q96MU6 729 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 NPY6RQ99463 290 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 XIRP2A4UGR9 3374 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 EVPLQ92817 2033 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 EPOPA6NHQ4 379 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 TMEM114B3SHH9 223 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 ITM2AO43736 263 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 AHCYL1O43865 530 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 BAIAP3O94812 1187 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 PRKCGP05129 697 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 RALBP11234 206 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 KCNE1P15382 129 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 CD52P31358 61 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 HADHAP40939 763 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 HCAR3P49019 387 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 TAF6P49848 677 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 IDH3AP50213 366 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SERPINB8P50452 374 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 HK2P52789 917 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SESN2P58004 480 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 DPYSQ14117 519 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 IKBKEQ14164 716 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SV2CQ496J9 727 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 FSCBQ5H9T9 825 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 OR52E8Q6IFG1 317 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 RASSF3Q86WH2 238 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SLC2A14Q8TDB8 520 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 ACTRT2Q8TDY3 377 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 NTAN1Q96AB6 310 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 TRAPPC9Q96Q05 1148 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SORT1Q99523 831 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 DUSP16Q9BY84 665 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
C9orf3-201ENST00000277198 MSRAQ9UJ68 235 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 MID2Q9UJV3 735 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 PCDHB12Q9Y5F1 795 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 RPS6KL1Q9Y6S9 549 aa13.18□□□□□ -0.3
C9orf3-201ENST00000277198 SMIM35A0A1B0GVV1 85 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 CCDC189A1A4V9 331 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 RFXAPO00287 272 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 ZNF195O14628 629 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms