RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 DUSP16Q9BY84 665 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 OXCT2Q9BYC2 517 aaPredicted RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 EXOSC4Q9NPD3 245 aaKnown RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 FMN2Q9NZ56 1722 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 KPNA5O15131 536 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 LAG3P18627 525 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 SSTR1P30872 391 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 SLC16A1P53985 500 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 UBE3AQ05086 875 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 IZUMO2Q6UXV1 221 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 DCLRE1BQ9H816 532 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 CNGB3Q9NQW8 809 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 TLL1O43897 1013 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 CES1P23141 567 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 PSMD7P51665 324 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 CRY1Q16526 586 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 TTC33Q6PID6 262 aaPredicted RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 KYAT3Q6YP21 454 aaKnown RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 CHMP1BQ7LBR1 199 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 NECAB2Q7Z6G3 386 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 APLFQ8IW19 511 aaPredicted RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 TRPC4Q9UBN4 977 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 FAM153BP0C7A2 387 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 SELPP16109 830 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 PSMB4P28070 264 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 IL2P60568 153 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 MRPS5P82675 430 aaKnown RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 SLC20A2Q08357 652 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 FAM153CQ494X1 144 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 ATAD3BQ5T9A4 648 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 PPP1R13LQ8WUF5 828 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 MRPL48Q96GC5 212 aaKnown RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 HIPK3Q9H422 1215 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 PIH1D1Q9NWS0 290 aaKnown RBP13.48□□□□□ -0.25
SMG9-201ENST00000270066 COMMD8Q9NX08 183 aa13.48□□□□□ -0.25
SMG9-201ENST00000270066 RGS14O43566 566 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 CATP04040 527 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 ARF4P18085 180 aaPredicted RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 CD86P42081 329 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 TRIM16LQ309B1 348 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 MTDHQ86UE4 582 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 FAM35AQ86V20 835 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 GPSM1Q86YR5 675 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 SLAIN1Q8ND83 568 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 LNX1Q8TBB1 728 aaPredicted RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 TCP10LQ8TDR4 215 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 RNF157Q96PX1 679 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 KRT84Q9NSB2 600 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 AKAP7Q9P0M2 348 aaPredicted RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 OPTCQ9UBM4 332 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 PCDHA11Q9Y5I1 949 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 TPST1O60507 370 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 ZNF682O95780 498 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 CLK1P49759 484 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 EEF1DP3Q658K8 133 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 NEPROQ6NW34 567 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 AFTPHQ6ULP2 937 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 CES3Q6UWW8 571 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 METTL6Q8TCB7 284 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 PAWRQ96IZ0 340 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 TAS2R14Q9NYV8 317 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 QSOX1O00391 747 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 OPLAHO14841 1288 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 ALADP13716 330 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 TSHRP16473 764 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 GRK4P32298 578 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 NAA20P61599 178 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 FMO1Q01740 532 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 IYDQ6PHW0 289 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 C11orf74Q86VG3 221 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 TRAPPC5Q8IUR0 188 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 NKAPQ8N5F7 415 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 ZNF655Q8N720 491 aaPredicted RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 FNDC5Q8NAU1 212 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 UNKQ9C0B0 810 aaKnown RBP13.47□□□□□ -0.25
SMG9-201ENST00000270066 SH3BP4Q9P0V3 963 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 NDUFS2O75306 463 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 GUCY1B2O75343 617 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 CTSEP14091 401 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 CCNB1P14635 433 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 MATKP42679 507 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 RXRGP48443 463 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 NOMO3P69849 1222 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 BRMS1LQ5PSV4 323 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 FAM45BPQ6NSW5 357 aa13.47□□□□□ -0.25
SMG9-201ENST00000270066 PLEKHM3Q6ZWE6 761 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms