RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 VAV1P15498 845 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 ACP1P24666 158 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 KRT9P35527 623 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 RECQLP46063 649 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 CDH4P55283 916 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 PPP2CBP62714 309 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 PPP2CAP67775 309 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 PTK2Q05397 1052 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 PAK1Q13153 545 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 PDCLQ13371 301 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 EIF4EBP2Q13542 120 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 BECN1Q14457 450 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 ACBD5Q5T8D3 534 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 SFMBT2Q5VUG0 894 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 OR6B2Q6IFH4 312 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 LRRC31Q6UY01 552 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 SPATS2Q86XZ4 545 aaKnown RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 ATP11CQ8NB49 1132 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 FAM131CQ96AQ9 280 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 SLC2A13Q96QE2 648 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 C2orf49Q9BVC5 232 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-201ENST00000267935 SYNCQ9H7C4 482 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 KLHL11Q9NVR0 708 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 VANGL2Q9ULK5 521 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 CTNND2Q9UQB3 1225 aa14.6□□□□□ -0.07
COMMD4-201ENST00000267935 NEMP2A6NFY4 417 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 SLC31A1O15431 190 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 PRNPP04156 253 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 AKT2P31751 481 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 NOS2P35228 1153 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 DUSP3P51452 185 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-201ENST00000267935 STX17P56962 302 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 NME3Q13232 169 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 TAF5Q15542 800 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 ARHGAP44Q17R89 818 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 CXorf57Q6NSI4 855 aaKnown RBP14.59□□□□□ -0.07
COMMD4-201ENST00000267935 GBP6Q6ZN66 633 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 CIR1Q86X95 450 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-201ENST00000267935 DCP2Q8IU60 420 aaKnown RBP14.59□□□□□ -0.07
COMMD4-201ENST00000267935 LSMEM2Q8N112 164 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 SH2D3CQ8N5H7 860 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 TMIEQ8NEW7 156 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 RFFLQ8WZ73 363 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 BBC3Q96PG8 261 aaPredicted RBP14.59□□□□□ -0.07
COMMD4-201ENST00000267935 SIK2Q9H0K1 926 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 WDCPQ9H6R7 721 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 SARDHQ9UL12 918 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 TBC1D30Q9Y2I9 924 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 NBEAQ8NFP9 2946 aa14.59□□□□□ -0.07
COMMD4-201ENST00000267935 WDFY3Q8IZQ1 3526 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 CAPN8A6NHC0 703 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 M0QYT0 321 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 KPNA3O00505 521 aaPredicted RBP14.58□□□□□ -0.08
COMMD4-201ENST00000267935 SIGLEC6O43699 453 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 F9P00740 461 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 THEGLP0DJG4 465 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 ITPKBP27987 946 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 CHRNA3P32297 505 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 MORC3Q14149 939 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 POM121L1PQ3SYA9 428 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 AGBL4Q5VU57 503 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 Q6ZVU0 165 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 ZDHHC17Q8IUH5 632 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 SNIP1Q8TAD8 396 aaKnown RBP14.58□□□□□ -0.08
COMMD4-201ENST00000267935 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 ALG14Q96F25 216 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 PPP1R16AQ96I34 528 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 ABCG4Q9H172 646 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 STAP1Q9ULZ2 295 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 PCDHGC3Q9UN70 934 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 HS3ST4Q9Y661 456 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 PLXNA2O75051 1894 aa14.58□□□□□ -0.08
COMMD4-201ENST00000267935 SHROOM3Q8TF72 1996 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 A0A1W2PQU0 124 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 BIN1O00499 593 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 SDC3O75056 442 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 PAGE1O75459 146 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 GRAP2O75791 330 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 PCDH8O95206 1070 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 MT-CO3P00414 261 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 RHOCP08134 193 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 NUMBP49757 651 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 CLCN6P51797 869 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 CLDN6P56747 220 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 BPIFB4P59827 614 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 PITX1P78337 314 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-201ENST00000267935 SLC6A3Q01959 620 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 KCNMA1Q12791 1236 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 PROX2Q3B8N5 592 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 BRMS1LQ5PSV4 323 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 KANSL1Q7Z3B3 1105 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 GPR155Q7Z3F1 870 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 SETD3Q86TU7 594 aaPredicted RBP14.57□□□□□ -0.08
COMMD4-201ENST00000267935 HORMAD1Q86X24 394 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 DCBLD1Q8N8Z6 715 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 C1orf131Q8NDD1 294 aaKnown RBP14.57□□□□□ -0.08
COMMD4-201ENST00000267935 OR4C6Q8NH72 309 aa14.57□□□□□ -0.08
COMMD4-201ENST00000267935 IFT43Q96FT9 208 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms