RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
HERC6-201ENST00000264346 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 A8MX80 341 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 PFDN6O15212 129 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 BPGMP07738 259 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 HNRNPLP14866 589 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC6-201ENST00000264346 HOXA11P31270 313 aaPredicted RBP12.78□□□□□ -0.36
HERC6-201ENST00000264346 GRK4P32298 578 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CD86P42081 329 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CHRNA4P43681 627 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 PTDSS1P48651 473 aaKnown RBP12.78□□□□□ -0.36
HERC6-201ENST00000264346 CXCR3P49682 368 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CYTH1Q15438 398 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 FBXO48Q5FWF7 155 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 NCBP2-AS2Q69YL0 99 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 IZUMO2Q6UXV1 221 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 FRA10AC1Q70Z53 315 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TMPRSS6Q8IU80 811 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CFAP52Q8N1V2 620 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TRIM62Q9BVG3 475 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 ARHGAP26Q9UNA1 814 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 PSAT1Q9Y617 370 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 COL1A2P08123 1366 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 SUPT3HB4E1H0 165 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 PAGE1O75459 146 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 SUPT3HO75486 399 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 DAB1O75553 588 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
HERC6-201ENST00000264346 CHRM3P20309 590 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 GRK2P25098 689 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 PTPN9P43378 593 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 SPDYAQ5MJ70 313 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 SNX32Q86XE0 403 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TDRPQ86YL5 185 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 EGFL8Q99944 293 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 FAM72CH0Y354 149 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 NCAM2O15394 837 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 USP1O94782 785 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 ASGR1P07306 291 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CDH5P33151 784 aaPredicted RBP12.78□□□□□ -0.36
HERC6-201ENST00000264346 ANKRD20A4Q4UJ75 823 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 SPANXN3Q5MJ09 141 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 FAM72AQ5TYM5 149 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 FAM72DQ6L9T8 149 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TMC7Q7Z402 723 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 FAM72BQ86X60 149 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
HERC6-201ENST00000264346 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
HERC6-201ENST00000264346 CPNE1Q99829 537 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
HERC6-201ENST00000264346 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
HERC6-201ENST00000264346 PRRG1O14668 218 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 SMNDC1O75940 238 aaKnown RBP eCLIP12.77□□□□□ -0.36
HERC6-201ENST00000264346 LINGO3P0C6S8 592 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.36
HERC6-201ENST00000264346 CNTFP26441 200 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 ABL2P42684 1182 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 RPS6KA3P51812 740 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 TBL3Q12788 808 aaKnown RBP12.77□□□□□ -0.36
HERC6-201ENST00000264346 FLOT2Q14254 428 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 KCNJ11Q14654 390 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 PSMD5Q16401 504 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 GRTP1Q5TC63 336 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 CAND1Q86VP6 1230 aaKnown RBP12.77□□□□□ -0.36
HERC6-201ENST00000264346 CIR1Q86X95 450 aaPredicted RBP12.77□□□□□ -0.36
HERC6-201ENST00000264346 TOP6BLQ8N6T0 577 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 SNX31Q8N9S9 440 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 TBL1YQ9BQ87 522 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 ACE2Q9BYF1 805 aaPredicted RBP12.77□□□□□ -0.36
HERC6-201ENST00000264346 PIF1Q9H611 641 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 USP29Q9HBJ7 922 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 CDH9Q9ULB4 789 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 SOX13Q9UN79 622 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 FAM50BQ9Y247 325 aa12.77□□□□□ -0.36
HERC6-201ENST00000264346 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.37
HERC6-201ENST00000264346 TK2O00142 265 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 TCEA3O75764 348 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 RHOBTB1O94844 696 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 PROZP22891 400 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
HERC6-201ENST00000264346 PPM1FP49593 454 aaPredicted RBP12.77□□□□□ -0.37
HERC6-201ENST00000264346 INCA1Q0VD86 236 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 SGO1Q5FBB7 561 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 NEPROQ6NW34 567 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 KYAT3Q6YP21 454 aaKnown RBP12.77□□□□□ -0.37
HERC6-201ENST00000264346 PNPLA1Q8N8W4 532 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 RBM15BQ8NDT2 890 aaKnown RBP12.77□□□□□ -0.37
HERC6-201ENST00000264346 GSTCDQ8NEC7 633 aa12.77□□□□□ -0.37
HERC6-201ENST00000264346 HNRNPABQ99729 332 aaKnown RBP12.77□□□□□ -0.37
HERC6-201ENST00000264346 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms