RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 OAS1P00973 400 aaKnown RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 CCNB1P14635 433 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 BGNP21810 368 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 FGFR3P22607 806 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 PAPOLAP51003 745 aaKnown RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 PDK4Q16654 411 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 C16orf46Q6P387 395 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 SH2D5Q6ZV89 423 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 TTC16Q8NEE8 873 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 IPMKQ8NFU5 416 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 ZSCAN18Q8TBC5 510 aaPredicted RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 ATP2A3Q93084 1043 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 KLHL5Q96PQ7 755 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 AGAP2Q99490 1192 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 ZNF395Q9H8N7 513 aaPredicted RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 SLC12A4Q9UP95 1085 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 KCNU1A8MYU2 1149 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 TRDMT1O14717 391 aaKnown RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 PMPCBO75439 489 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 CAPN15O75808 1086 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 KRT37O76014 449 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 ZWINTO95229 277 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 AP2A1O95782 977 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 MRPL58Q14197 206 aaKnown RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 TBC1D25Q3MII6 688 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 BRMS1LQ5PSV4 323 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 NDUFAF2Q8N183 169 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 SCML4Q8N228 414 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 APOPT1Q96IL0 206 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 C8orf48Q96LL4 319 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 TEKT5Q96M29 485 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 HAPLN3Q96S86 360 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 PAPOLBQ9NRJ5 636 aaKnown RBP13.85□□□□□ -0.19
VMP1-201ENST00000262291 MOCS1Q9NZB8 636 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 ATP11BQ9Y2G3 1177 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 PATJQ8NI35 1801 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 DPPA5A6NC42 116 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 UBOX5O94941 541 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 PGAM1P18669 254 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 NEK3P51956 506 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 MAXP61244 160 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 BLMHQ13867 455 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 PCSK7Q16549 785 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 SPOUT1Q5T280 376 aaKnown RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 TRPM8Q7Z2W7 1104 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 IGSF8Q969P0 613 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 SERPINB11Q96P15 392 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 TSC22D3Q99576 134 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 TTPALQ9BTX7 342 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 DCTN4Q9UJW0 460 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 SUN1O94901 812 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 PDHA1P08559 390 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 OR1D2P34982 312 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 KCNQ1P51787 676 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 MANEALQ5VSG8 457 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 OTOAQ7RTW8 1153 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 CFAP52Q8N1V2 620 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
VMP1-201ENST00000262291 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 IQCGQ9H095 443 aaKnown RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 EIF2B3Q9NR50 452 aaKnown RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 RBM22Q9NW64 420 aaKnown RBP eCLIP13.84□□□□□ -0.198e-63■■■■■ 27.1
VMP1-201ENST00000262291 ZFATQ9P243 1243 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 TRIM33Q9UPN9 1127 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 C2orf71A6NGG8 1288 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 J3KR12 359 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 NCAM2O15394 837 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 MAFKO60675 156 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 GJB3O75712 270 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 HLA-DQB2P05538 268 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 ATF6P18850 670 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 MLLT6P55198 1093 aaPredicted RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 CDK16Q00536 496 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 TAF11Q15544 211 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 MS4A13Q5J8X5 152 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 ZNF276Q8N554 614 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 PNPLA1Q8N8W4 532 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 AUTS2Q8WXX7 1259 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 TRIM62Q9BVG3 475 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 NOL6Q9H6R4 1146 aaKnown RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 ELAC1Q9H777 363 aaKnown RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 PRDM16Q9HAZ2 1276 aa13.84□□□□□ -0.19
VMP1-201ENST00000262291 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
VMP1-201ENST00000262291 OR6C75A6NL08 312 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 HAPLN1P10915 354 aaPredicted RBP13.83□□□□□ -0.2
VMP1-201ENST00000262291 MLNP12872 115 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 PAX3P23760 479 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 NMBRP28336 390 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 ETFBP38117 255 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 CHRNA4P43681 627 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 SLC18A2Q05940 514 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 USP4Q13107 963 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 ITIH4Q14624 930 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 POU6F1Q14863 301 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 ARHGEF6Q15052 776 aa13.83□□□□□ -0.2
VMP1-201ENST00000262291 HSP90AA5PQ58FG0 334 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms