RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ZMIZ2Q8NF64 920 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 GDPD5Q8WTR4 605 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 PGBD4Q96DM1 585 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 DNAJC1Q96KC8 554 aaKnown RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 PGLYRP2Q96PD5 576 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 CCDC106Q9BWC9 280 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 TSPYL2Q9H2G4 693 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 MARCOQ9UEW3 520 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 A0A088AWK7 358 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 AP1G1O43747 822 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 PGM3O95394 542 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 ERCC2P18074 760 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 IRX4P78413 519 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 SMAD1Q15797 465 aaKnown RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 ANKRD20A4Q4UJ75 823 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 CTU1Q7Z7A3 348 aaKnown RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 SLC9A7Q96T83 725 aa23.06■■□□□ 1.28
MCF2L-201ENST00000261963 HBS1LQ9Y450 684 aaKnown RBP23.06■■□□□ 1.28
MCF2L-201ENST00000261963 ARHGAP42A6NI28 874 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 ATP6V1G1O75348 118 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 FKBP1BP68106 108 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 UGT2A3Q6UWM9 527 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 CES3Q6UWW8 571 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 RBM44Q6ZP01 1051 aaKnown RBP23.05■■□□□ 1.28
MCF2L-201ENST00000261963 FAM35AQ86V20 835 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 ACMSDQ8TDX5 336 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 IRGQQ8WZA9 623 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 CDKL2Q92772 493 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 NTAN1Q96AB6 310 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 PRICKLE1Q96MT3 831 aaPredicted RBP23.05■■□□□ 1.28
MCF2L-201ENST00000261963 KCNK16Q96T55 309 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 SOX13Q9UN79 622 aa23.05■■□□□ 1.28
MCF2L-201ENST00000261963 TIMM13Q9Y5L4 95 aaPredicted RBP23.05■■□□□ 1.28
MCF2L-201ENST00000261963 A0A0J9YVX5 310 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 MYBPHLA2RUH7 354 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 TXNDC9O14530 226 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 VILLO15195 856 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 KITP10721 976 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 ALDH18A1P54886 795 aaKnown RBP23.04■■□□□ 1.28
MCF2L-201ENST00000261963 PDE1BQ01064 536 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 SCAPQ12770 1279 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 STXBP5Q5T5C0 1151 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 PID1Q7Z2X4 250 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 FERMT1Q9BQL6 677 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 ADAMTS6Q9UKP5 1117 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 FBXO21O94952 628 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 PTPN3P26045 913 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 RPL5P46777 297 aaKnown RBP23.04■■□□□ 1.28
MCF2L-201ENST00000261963 AQP5P55064 265 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 IFRD2Q12894 506 aaPredicted RBP23.04■■□□□ 1.28
MCF2L-201ENST00000261963 STX3Q13277 289 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 NAB1Q13506 487 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 FASTKD1Q53R41 847 aaKnown RBP23.04■■□□□ 1.28
MCF2L-201ENST00000261963 N4BP2L1Q5TBK1 243 aaPredicted RBP23.04■■□□□ 1.28
MCF2L-201ENST00000261963 RNF111Q6ZNA4 994 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 CRLF3Q8IUI8 442 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 SLC26A7Q8TE54 656 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 PCED1BQ96HM7 432 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 NAT9Q9BTE0 207 aa23.04■■□□□ 1.28
MCF2L-201ENST00000261963 PRR5-ARHGAP8B1AHC4 643 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 MLH1P40692 756 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 ARHGAP8P85298 464 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 CDK18Q07002 472 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 MBLAC2Q68D91 279 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 NPWQ8N729 165 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 FCRL3Q96P31 734 aaPredicted RBP23.03■■□□□ 1.28
MCF2L-201ENST00000261963 AP5M1Q9H0R1 490 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 SSX2IPQ9Y2D8 614 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 CENPFP49454 3210 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 C9IYK1 514 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 PRKCGP05129 697 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 ERVK-10P10266 1014 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 PEX2P28328 305 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 GJA9P57773 515 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 PURAQ00577 322 aaKnown RBP23.03■■□□□ 1.28
MCF2L-201ENST00000261963 RAB41Q5JT25 222 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 C3orf58Q8NDZ4 430 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 OR52K1Q8NGK4 314 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 THAP1Q9NVV9 213 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 MIOSQ9NXC5 875 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 KLHL8Q9P2G9 620 aaPredicted RBP23.03■■□□□ 1.28
MCF2L-201ENST00000261963 FBXW11Q9UKB1 542 aa23.03■■□□□ 1.28
MCF2L-201ENST00000261963 C15orf38-AP3S2A0A0A6YYH1 394 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 PLIN3O60664 434 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 ATP5BP06576 529 aaKnown RBP23.02■■□□□ 1.28
MCF2L-201ENST00000261963 USP17L7P0C7H9 530 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 RPL10AP62906 217 aaKnown RBP23.02■■□□□ 1.28
MCF2L-201ENST00000261963 CYLC2Q14093 348 aaPredicted RBP23.02■■□□□ 1.28
MCF2L-201ENST00000261963 ARPINQ7Z6K5 226 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 RILPQ96NA2 401 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 GAD1Q99259 594 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 KATNAL1Q9BW62 490 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 GLRA3O75311 464 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 SMIM18P0DKX4 95 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 FGF3P11487 239 aaPredicted RBP23.02■■□□□ 1.28
MCF2L-201ENST00000261963 CPOXP36551 454 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 CLCNKBP51801 687 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 AIF1P55008 147 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 BHLHA9Q7RTU4 235 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 ICA1LQ8NDH6 482 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms