RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 LTBP3Q9NS15 1303 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 CENPXA8MT69 81 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 TREHO43280 583 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 ARF4P18085 180 aaPredicted RBP11.07□□□□□ -0.64
URB2-201ENST00000258243 MAPK1P28482 360 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 OR1D2P34982 312 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
URB2-201ENST00000258243 ACAP1Q15027 740 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 GPR141Q7Z602 305 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 MTDHQ86UE4 582 aaKnown RBP11.07□□□□□ -0.64
URB2-201ENST00000258243 CCDC36Q8IYA8 594 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 SMG7Q92540 1137 aaKnown RBP11.07□□□□□ -0.64
URB2-201ENST00000258243 WNT8BQ93098 351 aa11.07□□□□□ -0.64
URB2-201ENST00000258243 MAGEB16A2A368 324 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 NCF1BA6NI72 391 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 NCF1CA8MVU1 366 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 MEI4A8MW99 385 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 B4GALT5O43286 388 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 NCF1P14598 390 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 PSMC3P17980 439 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 GABRR2P28476 465 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 PTPN4P29074 926 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CACNA2D1P54289 1103 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 TAB1Q15750 504 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 UGCGQ16739 394 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 RAP1GAP2Q684P5 730 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 C16orf89Q6UX73 402 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 MTSS1LQ765P7 747 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 KCNK18Q7Z418 384 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CCDC126Q96EE4 140 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 RIPOR3Q96MK2 946 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 FAM111AQ96PZ2 611 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 OSGEPQ9NPF4 335 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 UBP1Q9NZI7 540 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 PIK3C2AO00443 1686 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 ARPC4-TTLL3A0A0A6YYG9 625 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 GUCA1CO95843 209 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 ZNF7P17097 686 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 MMP13P45452 471 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 NCKAP1LP55160 1127 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CNTN1Q12860 1018 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 ILF2Q12905 390 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 EPS8Q12929 822 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 USF2Q15853 346 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 HSDL1Q3SXM5 330 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SWT1Q5T5J6 900 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 FAM46CQ5VWP2 391 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 GLT6D1Q7Z4J2 308 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CTU1Q7Z7A3 348 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 KIFC1Q9BW19 673 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 PRDM16Q9HAZ2 1276 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 MRPL39Q9NYK5 338 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 DTNAQ9Y4J8 743 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SLIT2O94813 1529 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 TISP43B9A030 160 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 AKAP10O43572 662 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SPATA31D3P0C874 917 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CCDC166P0CW27 439 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 MYBL2P10244 700 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 PCNAP12004 261 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 AMPD1P23109 780 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 CACHD1Q5VU97 1274 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SPATA31D4Q6ZUB0 917 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 PTAR1Q7Z6K3 402 aaPredicted RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 METTL3Q86U44 580 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 BRI3BPQ8WY22 251 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 ARNTL2Q8WYA1 636 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 HSFY1Q96LI6 401 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 RUVBL2Q9Y230 463 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 HACD1B0YJ81 288 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 CCL5P13501 91 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 TNFSF9P41273 254 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 C21orf59P57076 290 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 KCNK10P57789 538 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 IZUMO2Q6UXV1 221 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 DNAAF5Q86Y56 855 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 SLC35C1Q96A29 364 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 POLR1EQ9GZS1 481 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 AASDHPPTQ9NRN7 309 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 WHRNQ9P202 907 aa11.06□□□□□ -0.64
URB2-201ENST00000258243 TDRKHQ9Y2W6 561 aaKnown RBP11.06□□□□□ -0.64
URB2-201ENST00000258243 TCN1P20061 433 aaPredicted RBP11.05□□□□□ -0.64
URB2-201ENST00000258243 COPAP53621 1224 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 CDH17Q12864 832 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 WLSQ5T9L3 541 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 SHQ1Q6PI26 577 aaKnown RBP11.05□□□□□ -0.64
URB2-201ENST00000258243 LRRC52Q8N7C0 313 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 SGF29Q96ES7 293 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 SHCBP1LQ9BZQ2 653 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 FAM192AQ9GZU8 254 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 NXF3Q9H4D5 531 aaKnown RBP11.05□□□□□ -0.64
URB2-201ENST00000258243 SRRDQ9UH36 339 aa11.05□□□□□ -0.64
URB2-201ENST00000258243 STOML2Q9UJZ1 356 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms