RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 NR0B2Q15466 257 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 ZFHX3Q15911 3703 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 BORAQ6PGQ7 559 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 MMS22LQ6ZRQ5 1243 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 CCDC117Q8IWD4 279 aaPredicted RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 HJURPQ8NCD3 748 aaPredicted RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 PLEKHO2Q8TD55 490 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 KLK6Q92876 244 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 RPL10LQ96L21 214 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 EPB41L5Q9HCM4 733 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 PREBQ9HCU5 417 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 FZD3Q9NPG1 666 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 TYW5A2RUC4 315 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 H3BM21 787 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 NVLO15381 856 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 MOCS3O95396 460 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 ZBED1O96006 694 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 C4BPAP04003 597 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 VAV1P15498 845 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 SLC6A4P31645 630 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 SLC11A2P49281 568 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 POLE2P56282 527 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 CLDN2P57739 230 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 DEFB133Q30KQ1 61 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 PPP1R26Q5T8A7 1209 aaPredicted RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 FAM46CQ5VWP2 391 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 SPOPLQ6IQ16 392 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 PIGZQ86VD9 579 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 CARNMT1Q8N4J0 409 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 TAF4BQ92750 862 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 NAT6Q93015 286 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 MYCBPQ99417 103 aaPredicted RBP12.34□□□□□ -0.43
RFPL3-201ENST00000249007 STRADBQ9C0K7 418 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 PCDHB11Q9Y5F2 797 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
RFPL3-201ENST00000249007 F8P00451 2351 aa12.33□□□□□ -0.43
RFPL3-201ENST00000249007 OTOGQ6ZRI0 2925 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 A0A1W2PQU0 124 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 LRRIQ3A6PVS8 624 aaPredicted RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 EXOC3O60645 756 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 MBD3O95983 291 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 JMJD7P0C870 316 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 HGFP14210 728 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 HNRNPA2B1P22626 353 aaKnown RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 NNMTP40261 264 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 STAT6P42226 847 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 RPIAP49247 311 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 STK19P49842 368 aaPredicted RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 TKTL1P51854 596 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 RPS24P62847 133 aaKnown RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 CLDN10P78369 228 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 FSCBQ5H9T9 825 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 CCDC73Q6ZRK6 1079 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 Q6ZSR6 202 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 PTAR1Q7Z6K3 402 aaPredicted RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 B3GNT8Q7Z7M8 397 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 ZNF507Q8TCN5 953 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 EDEM1Q92611 657 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
RFPL3-201ENST00000249007 IL12RB2Q99665 862 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 CCDC3Q9BQI4 270 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 DNAI2Q9GZS0 605 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 TMPRSS4Q9NRS4 437 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 FAM53CQ9NYF3 392 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 PISDQ9UG56 409 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 TUBD1Q9UJT1 453 aa12.33□□□□□ -0.44
RFPL3-201ENST00000249007 UNC13CQ8NB66 2214 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 A6NNZ2 444 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 AQP9O43315 295 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 CSF2P04141 144 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 CD58P19256 250 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 TAS2R38P59533 333 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 SNRPFP62306 86 aaKnown RBP12.32□□□□□ -0.44
RFPL3-201ENST00000249007 ZNF284Q2VY69 593 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 OR6B2Q6IFH4 312 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 GCNT7Q6ZNI0 430 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 EPM2AIP1Q7L775 607 aaPredicted RBP12.32□□□□□ -0.44
RFPL3-201ENST00000249007 BHLHA9Q7RTU4 235 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 PARGQ86W56 976 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 ATCAYQ86WG3 371 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 DCP2Q8IU60 420 aaKnown RBP12.32□□□□□ -0.44
RFPL3-201ENST00000249007 NELFCDQ8IXH7 590 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 OR8D1Q8WZ84 308 aa12.32□□□□□ -0.44
RFPL3-201ENST00000249007 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms