RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 KLF10Q13118 480 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 FLOT2Q14254 428 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 NAPEPLDQ6IQ20 393 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 ACVR1CQ8NER5 493 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 OR6P1Q8NGX9 317 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 FNDC3AQ9Y2H6 1198 aaKnown RBP12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 A0A088AWK7 358 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 F8W8V4 182 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 TOMM70O94826 608 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 AP2A1O95782 977 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 MAGEA3P43357 314 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 LIMK2P53671 638 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 TMC7Q7Z402 723 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 PNPLA1Q8N8W4 532 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 S100A14Q9HCY8 104 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 DERAQ9Y315 318 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 NRCAMQ92823 1304 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 COL1A2P08123 1366 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 LRIG2O94898 1065 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 MAGEA6P43360 314 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 NAPRTQ6XQN6 538 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 GPRIN1Q7Z2K8 1008 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 PTAR1Q7Z6K3 402 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 NPWQ8N729 165 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 SNX31Q8N9S9 440 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 ARRDC4Q8NCT1 418 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 OR6Y1Q8NGX8 325 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 PCED1BQ96HM7 432 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 SERPINI1Q99574 410 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 CDH19Q9H159 772 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 MID2Q9UJV3 735 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 LYNP07948 512 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 ETS2P15036 469 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 ARL1P40616 181 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 SCNN1GP51170 649 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 MPP1Q00013 466 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 CDH17Q12864 832 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 MAPK15Q8TD08 544 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 CENPIQ92674 756 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 OLFM3Q96PB7 478 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 TUBGCP5Q96RT8 1024 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 ADAMTS10Q9H324 1103 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 POMPQ9Y244 141 aa12.84□□□□□ -0.35
RAB3IP-201ENST00000247833 PIRO00625 290 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 AOC1P19801 751 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 IRX1P78414 480 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 CSHL1Q14406 222 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 CNGA3Q16281 694 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 MAP7D1Q3KQU3 841 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ARL13AQ5H913 290 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 MAP3K21Q5TCX8 1036 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 TIFABQ6ZNK6 161 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 RCN3Q96D15 328 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 PABPC5Q96DU9 382 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 NPY6RQ99463 290 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 NDNQ99608 321 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 XPR1Q9UBH6 696 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 CDYLQ9Y232 598 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ACOT9Q9Y305 439 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 RLFQ13129 1914 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 A6NHS1 94 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 STRNO43815 780 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ATP6V1B1P15313 513 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 TSPAN8P19075 237 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ARRB2P32121 409 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 SOX11P35716 441 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 GLUD2P49448 558 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 AFF1P51825 1210 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ZNF470Q6ECI4 717 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 PHF21BQ96EK2 531 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 SORT1Q99523 831 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 FTHL17Q9BXU8 183 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 DTNAQ9Y4J8 743 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 MAP3K13O43283 966 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 MSI1O43347 362 aaKnown RBP12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ZBTB14O43829 449 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 THP07101 528 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 PSEN2P49810 448 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 CLCNKBP51801 687 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 AQP4P55087 323 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 ANO4Q32M45 955 aa12.83□□□□□ -0.36
RAB3IP-201ENST00000247833 BTBD8Q5XKL5 378 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms