RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TMEM63BQ5T3F8 832 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 FAM13CQ8NE31 585 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 C19orf18Q8NEA5 215 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 ULBP1Q9BZM6 244 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 CEP44Q9C0F1 390 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 RIBC2Q9H4K1 309 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 LRRC4CQ9HCJ2 640 aa20.16■□□□□ 0.82
SOX4-201ENST00000244745 R3HDM2Q9Y2K5 976 aaKnown RBP20.16■□□□□ 0.82
SOX4-201ENST00000244745 TMEM114B3SHH9 223 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 BTN3A1O00481 513 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 SYNCRIPO60506 623 aaKnown RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 RENBPP51606 427 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ZNF112Q9UJU3 913 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ITGB1BP2Q9UKP3 347 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 TMCC3Q9ULS5 477 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 RAMP2O60895 175 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 CNOT3O75175 753 aaKnown RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 OR1E1P30953 314 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 DNAJC14Q6Y2X3 702 aaPredicted RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 SEMA4BQ9NPR2 832 aaPredicted RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 DMTF1Q9Y222 760 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 VPS4BO75351 444 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 OVOS1Q6IE37 1185 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ARCQ7LC44 396 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 GLT6D1Q7Z4J2 308 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 PLA2G4CQ9UP65 541 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 TRAF3Q13114 568 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 NT5DC4Q86YG4 428 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 FAM9CQ8IZT9 166 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ITFG1Q8TB96 612 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 TPD52L3Q96J77 140 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ACO2Q99798 780 aaKnown RBP20.15■□□□□ 0.82
SOX4-201ENST00000244745 IL22Q9GZX6 179 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ADAM28Q9UKQ2 775 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 PTGES3LE9PB15 166 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 MED26O95402 600 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 SERPINF2P08697 491 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 JAM2P57087 298 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 TTC7BQ86TV6 843 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 MFSD14AQ96MC6 490 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 TAS2R13Q9NYV9 303 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
SOX4-201ENST00000244745 ABCB1P08183 1280 aaPredicted RBP20.14■□□□□ 0.82
SOX4-201ENST00000244745 NEK3P51956 506 aa20.14■□□□□ 0.82
SOX4-201ENST00000244745 DDR2Q16832 855 aa20.14■□□□□ 0.82
SOX4-201ENST00000244745 BBS12Q6ZW61 710 aa20.14■□□□□ 0.82
SOX4-201ENST00000244745 FBXW8Q8N3Y1 598 aa20.14■□□□□ 0.82
SOX4-201ENST00000244745 TLR8Q9NR97 1041 aaKnown RBP20.14■□□□□ 0.82
SOX4-201ENST00000244745 SEC22BO75396 215 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 ATG7O95352 703 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 VAV1P15498 845 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 NAGLUP54802 743 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 C15orf52Q6ZUT6 534 aaKnown RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 FAM126BQ8IXS8 530 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 HGH1Q9BTY7 390 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 BIRC5O15392 142 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 ALDH7A1P49419 539 aaKnown RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 SFSWAPQ12872 951 aaKnown RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 ANKS6Q68DC2 871 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 TTC27Q6P3X3 843 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 NANOGNBQ7Z5D8 188 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 UTP15Q8TED0 518 aaKnown RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 SYNPO2Q9UMS6 1093 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 TAF4O00268 1085 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 TSPAN3O60637 253 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 CAPSQ13938 189 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 PCID2Q5JVF3 399 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 TNS4Q8IZW8 715 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 LRRC57Q8N9N7 239 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 EBNA1BP2Q99848 306 aaKnown RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 TMEM165Q9HC07 324 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 CELF2O95319 508 aaKnown RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 SP100P23497 879 aaPredicted RBP20.14■□□□□ 0.81
SOX4-201ENST00000244745 GABRB2P47870 512 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 SQLEQ14534 574 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 UGT2B28Q9BY64 529 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 SLC25A13Q9UJS0 675 aa20.14■□□□□ 0.81
SOX4-201ENST00000244745 RAD51BO15315 384 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 GRIA3P42263 894 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 MSLNQ13421 630 aaPredicted RBP20.13■□□□□ 0.81
SOX4-201ENST00000244745 DGKZQ13574 1117 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 KCTD4Q8WVF5 259 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 P2RX7Q99572 595 aaKnown RBP20.13■□□□□ 0.81
SOX4-201ENST00000244745 PNPOQ9NVS9 261 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 ITGA2BP08514 1039 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 GOT1P17174 413 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 WASHC5Q12768 1159 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 BNIP1Q12981 228 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 MAD2L1Q13257 205 aaPredicted RBP20.13■□□□□ 0.81
SOX4-201ENST00000244745 SPATA6LQ8N4H0 392 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 METTL6Q8TCB7 284 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 FNIP1Q8TF40 1166 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 VAT1Q99536 393 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 OMDQ99983 421 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 YIPF2Q9BWQ6 316 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 ENTPD7Q9NQZ7 604 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 LGR5O75473 907 aa20.13■□□□□ 0.81
SOX4-201ENST00000244745 UQCRBP14927 111 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms