RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ARHGAP42A6NI28 874 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 CBX4O00257 560 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 KDELR3O43731 214 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 MT-CO1P00395 513 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 RBP3P10745 1247 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 STK19P49842 368 aaPredicted RBP20.58■□□□□ 0.89
SNRPA-201ENST00000243563 PPIDQ08752 370 aaKnown RBP20.58■□□□□ 0.89
SNRPA-201ENST00000243563 CYP1B1Q16678 543 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 MBLAC2Q68D91 279 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 PRUNE1Q86TP1 453 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 CCDC117Q8IWD4 279 aaPredicted RBP20.58■□□□□ 0.89
SNRPA-201ENST00000243563 DCAF4L2Q8NA75 395 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 CCNYQ8ND76 341 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 HDAC11Q96DB2 347 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 PNKPQ96T60 521 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 CEP41Q9BYV8 373 aa20.58■□□□□ 0.89
SNRPA-201ENST00000243563 DDX47Q9H0S4 455 aaKnown RBP20.58■□□□□ 0.89
SNRPA-201ENST00000243563 F5P12259 2224 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 KRBA1A5PL33 1030 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 H7C0C1 242 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 PRAMEF11O60813 436 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 KAT7O95251 611 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 CHRM1P11229 460 aaPredicted RBP20.57■□□□□ 0.88
SNRPA-201ENST00000243563 RBL1P28749 1068 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 EIF2DP41214 584 aaKnown RBP20.57■□□□□ 0.88
SNRPA-201ENST00000243563 ATP5OP48047 213 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 GDF10P55107 478 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 OXCT1P55809 520 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 WHAMMP3Q1A5X7 153 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 FSTL4Q6MZW2 842 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 TPRG1Q6ZUI0 275 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 ZNF572Q7Z3I7 529 aaPredicted RBP20.57■□□□□ 0.88
SNRPA-201ENST00000243563 AHI1Q8N157 1196 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 TTC13Q8NBP0 860 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 CYB5D2Q8WUJ1 264 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 P2RY13Q9BPV8 354 aa20.57■□□□□ 0.88
SNRPA-201ENST00000243563 MYO18AQ92614 2054 aaKnown RBP20.57■□□□□ 0.88
SNRPA-201ENST00000243563 K7ERQ8 282 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 KCNK1O00180 336 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MCF2LO15068 1137 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 PAFAH1B1P43034 410 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 PFKPQ01813 784 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 AP1B1Q10567 949 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 PDK1Q15118 436 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 CCNG2Q16589 344 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 SLC45A4Q5BKX6 768 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 EMC10Q5UCC4 262 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 RALGPS2Q86X27 583 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 C12orf50Q8NA57 414 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 SPATA4Q8NEY3 305 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MAIP1Q8WWC4 291 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 NKD2Q969F2 451 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 RPL10LQ96L21 214 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 TSGA13Q96PP4 275 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 NAP1L3Q99457 506 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 TMEM121Q9BTD3 319 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 L2HGDHQ9H9P8 463 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 USP29Q9HBJ7 922 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 DONSONQ9NYP3 566 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 RNF14Q9UBS8 474 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 RAD54BQ9Y620 910 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 SMAD6O43541 496 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 PHF2O75151 1096 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 EGFP01133 1207 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 CLCN6P51797 869 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MRPS25P82663 173 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 ZBTB17Q13105 803 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 XRCC4Q13426 336 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 SLC12A1Q13621 1099 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 BYSLQ13895 437 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MLF2Q15773 248 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 PTPRNQ16849 979 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 DARS2Q6PI48 645 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 GLIS1Q8NBF1 620 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 USP33Q8TEY7 942 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 TFB1MQ8WVM0 346 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MAGOHBQ96A72 148 aaKnown RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 TTC17Q96AE7 1141 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MYO19Q96H55 970 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 MRGPRX3Q96LB0 322 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 CARD6Q9BX69 1037 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 C8orf33Q9H7E9 229 aaPredicted RBP20.56■□□□□ 0.88
SNRPA-201ENST00000243563 SP110Q9HB58 689 aa20.56■□□□□ 0.88
SNRPA-201ENST00000243563 K7EQS6 105 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 PPP1R12AO14974 1030 aaPredicted RBP20.55■□□□□ 0.88
SNRPA-201ENST00000243563 MX2P20592 715 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 IL10RBQ08334 325 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 SLC10A7Q0GE19 358 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 WASHC5Q12768 1159 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 TMEM196Q5HYL7 178 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 TJAP1Q5JTD0 557 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 KLHL7Q8IXQ5 586 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 CCDC13Q8IYE1 715 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 CIPCQ9C0C6 399 aa20.55■□□□□ 0.88
SNRPA-201ENST00000243563 BCLAF3A2AJT9 711 aaKnown RBP20.54■□□□□ 0.88
SNRPA-201ENST00000243563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ETS1P14921 441 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 CCNCP24863 283 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ETFBP38117 255 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 COILP38432 576 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms