RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 NAPEPLDQ6IQ20 393 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SETD3Q86TU7 594 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 DEFB106AQ8N104 65 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ZCCHC9Q8N567 271 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 FAM47BQ8NA70 645 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SLC8A2Q9UPR5 921 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 PXDNQ92626 1479 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 MPOP05164 745 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 KCNT2Q6UVM3 1135 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 FAM183BPQ6ZVS7 135 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 TMEM110Q86TL2 294 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ZNF570Q96NI8 536 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LRRC40Q9H9A6 602 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 COPG2Q9UBF2 871 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LACTBL1A8MY62 500 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 KCNU1A8MYU2 1149 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LYNP07948 512 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 MPZL3Q6UWV2 235 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SLCO6A1Q86UG4 719 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 IZUMO1Q8IYV9 350 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ADGRF2Q8IZF7 708 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ZNF606Q8WXB4 792 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LRTOMTQ8WZ04 291 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 AREL1O15033 823 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 PIK3R1P27986 724 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LAMTOR4Q0VGL1 99 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 TP53BP2Q13625 1128 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ANGEL2Q5VTE6 544 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 HSPBAP1Q96EW2 488 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LRMDAQ9H2I8 198 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 BOP1Q14137 746 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 OSMRQ99650 979 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 FDXACB1Q9BRP7 624 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 POLE4Q9NR33 117 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ANAPC2Q9UJX6 822 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 IQGAP1P46940 1657 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 KLRC4O43908 158 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 PTPN5P54829 565 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 IL27RAQ6UWB1 636 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ILDR2Q71H61 639 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 GPR156Q8NFN8 814 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 EXOC2Q96KP1 924 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 FOXP3Q9BZS1 431 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 WDR35Q9P2L0 1181 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 POLLQ9UGP5 575 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 TIMM44O43615 452 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 IL18RAPO95256 599 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.192e-8■■□□□ 12.3
RIF1-201ENST00000243326 EFNA5P52803 228 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SIM2Q14190 667 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 OTUB1Q96FW1 271 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 MYH11P35749 1972 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 DPYSL4O14531 572 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ERAP2Q6P179 960 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SLC7A5P2Q9GIP4 190 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 TPK1Q9H3S4 243 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 NMRAL1Q9HBL8 299 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 AJAP1Q9UKB5 411 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 YARS2Q9Y2Z4 477 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 PPRC1Q5VV67 1664 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 CES2O00748 559 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 HNF4AP41235 474 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 PRKAG1P54619 331 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ADRM1Q16186 407 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ZNF366Q8N895 744 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ATAD3AQ9NVI7 634 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SPATA31A3Q5VYP0 1347 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 OR7A2PQ8NGA2 310 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SPATA20Q8TB22 786 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 GAL3ST1Q99999 423 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 CNPY3Q9BT09 278 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 CNOT7Q9UIV1 285 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 FCER2P06734 321 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ABCD1P33897 745 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 TUFMP49411 452 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 MXD1Q05195 221 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 NCF4Q15080 339 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 UNC5AQ6ZN44 842 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 CHIAQ9BZP6 476 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 PLGRKTQ9HBL7 147 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 THAP1Q9NVV9 213 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SHOX2O60902 331 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 VPS26AO75436 327 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 MAXP61244 160 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 ELMOD1Q8N336 334 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 WDR36Q8NI36 951 aaKnown RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 SETD4Q9NVD3 440 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 LNPEPQ9UIQ6 1025 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 POLR3HQ9Y535 204 aaPredicted RBP7.63□□□□□ -1.19
RIF1-201ENST00000243326 MROH2AA6NES4 1674 aa7.63□□□□□ -1.19
RIF1-201ENST00000243326 SLC12A8A0AV02 714 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 RPS6KA5O75582 802 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 DNAJB2P25686 324 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 SLC5A3P53794 718 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 CSTF3Q12996 717 aaKnown RBP7.62□□□□□ -1.19
RIF1-201ENST00000243326 ZNF460Q14592 562 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 DGUOKQ16854 277 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 FBXO39Q8N4B4 442 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 TMPRSS4Q9NRS4 437 aa7.62□□□□□ -1.19
RIF1-201ENST00000243326 MGAT4DA6NG13 374 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms