RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 CSPG5O95196 566 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 LRG1P02750 347 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 IRF1P10914 325 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 DNAJB1P25685 340 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 CRADDP78560 199 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 POLD3Q15054 466 aaPredicted RBP23.13■■□□□ 1.29
RNF170-201ENST00000240159 PARP15Q460N3 678 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 ADGRD1Q6QNK2 874 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 CCDC149Q6ZUS6 474 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 KREMEN2Q8NCW0 462 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 ARNTL2Q8WYA1 636 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 ZFRQ96KR1 1074 aaKnown RBP23.13■■□□□ 1.29
RNF170-201ENST00000240159 FCRL5Q96RD9 977 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 SLC22A12Q96S37 553 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 CYP2S1Q96SQ9 504 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 TRPC7Q9HCX4 862 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 CASS4Q9NQ75 786 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 UBP1Q9NZI7 540 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 PCDHA11Q9Y5I1 949 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 J3KR12 359 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 HLA-DQB2P05538 268 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 C8AP07357 584 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 MBL2P11226 248 aaPredicted RBP23.13■■□□□ 1.29
RNF170-201ENST00000240159 MSH2P43246 934 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 NR1H3Q13133 447 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 PLPP4Q5VZY2 271 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 SRRM1Q8IYB3 904 aaKnown RBP23.13■■□□□ 1.29
RNF170-201ENST00000240159 GSDMBQ8TAX9 411 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 DCAKDQ8WVC6 231 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 LRRC40Q9H9A6 602 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 SMPD4Q9NXE4 827 aa23.13■■□□□ 1.29
RNF170-201ENST00000240159 AGO1Q9UL18 857 aaKnown RBP23.13■■□□□ 1.29
RNF170-201ENST00000240159 ZFP37Q9Y6Q3 630 aaPredicted RBP23.13■■□□□ 1.29
RNF170-201ENST00000240159 LAMA2P24043 3122 aaKnown RBP23.12■■□□□ 1.29
RNF170-201ENST00000240159 LINC01553A4QN01 128 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 C2orf71A6NGG8 1288 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 OBSL1O75147 1896 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 PRKCHP24723 683 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 YBEYP58557 167 aaPredicted RBP23.12■■□□□ 1.29
RNF170-201ENST00000240159 HNRNPDQ14103 355 aaKnown RBP23.12■■□□□ 1.29
RNF170-201ENST00000240159 TXNDC8Q6A555 127 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 CASC4Q6P4E1 433 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 TRABD2AQ86V40 505 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.12■■□□□ 1.29
RNF170-201ENST00000240159 MRPL43Q8N983 215 aaKnown RBP23.12■■□□□ 1.29
RNF170-201ENST00000240159 SPATA22Q8NHS9 363 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 SPPL3Q8TCT6 385 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 POF1BQ8WVV4 589 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 PRICKLE1Q96MT3 831 aaPredicted RBP23.12■■□□□ 1.29
RNF170-201ENST00000240159 LRRC3Q9BY71 257 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 SP110Q9HB58 689 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 SYBUQ9NX95 663 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 ACTL7BQ9Y614 415 aa23.12■■□□□ 1.29
RNF170-201ENST00000240159 PSMD3O43242 534 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 OLFM2O95897 454 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 CHN1P15882 459 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 GABRR2P28476 465 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 IFNAR2P48551 515 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 RABGAP1LQ5R372 815 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 ADGRF1Q5T601 910 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 STEAP4Q687X5 459 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 GAREM2Q75VX8 874 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 TMC8Q8IU68 726 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 HS6ST3Q8IZP7 471 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 ARL14EPQ8N8R7 260 aaPredicted RBP23.11■■□□□ 1.29
RNF170-201ENST00000240159 C17orf80Q9BSJ5 609 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 MTIF3Q9H2K0 278 aaKnown RBP23.11■■□□□ 1.29
RNF170-201ENST00000240159 RETREG1Q9H6L5 497 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 AAR2Q9Y312 384 aaKnown RBP23.11■■□□□ 1.29
RNF170-201ENST00000240159 GLUD1P00367 558 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 LSP1P33241 339 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 RENBPP51606 427 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 RPS24P62847 133 aaKnown RBP23.11■■□□□ 1.29
RNF170-201ENST00000240159 SERINC3Q13530 473 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 ZNF354CQ86Y25 554 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 CCNJLQ8IV13 435 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 SLC44A1Q8WWI5 657 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 RWDD3Q9Y3V2 267 aa23.11■■□□□ 1.29
RNF170-201ENST00000240159 H3BNC9 293 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 ANXA9O76027 345 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 NEBLO76041 1014 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 BRAFP15056 766 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 PGAM1P18669 254 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 KRT15P19012 456 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 ACVRL1P37023 503 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 CDH4P55283 916 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 SMAD3P84022 425 aaKnown RBP23.1■■□□□ 1.29
RNF170-201ENST00000240159 TRMT10BQ6PF06 316 aaKnown RBP23.1■■□□□ 1.29
RNF170-201ENST00000240159 DNAAF3Q8N9W5 541 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 APOL2Q9BQE5 337 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 NAT9Q9BTE0 207 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 TLR9Q9NR96 1032 aa23.1■■□□□ 1.29
RNF170-201ENST00000240159 MT-CYBP00156 380 aaPredicted RBP23.09■■□□□ 1.29
RNF170-201ENST00000240159 HDCP19113 662 aa23.09■■□□□ 1.29
RNF170-201ENST00000240159 CYP4F8P98187 520 aa23.09■■□□□ 1.29
RNF170-201ENST00000240159 IL10RBQ08334 325 aa23.09■■□□□ 1.29
RNF170-201ENST00000240159 SLC10A7Q0GE19 358 aa23.09■■□□□ 1.29
RNF170-201ENST00000240159 NAPEPLDQ6IQ20 393 aa23.09■■□□□ 1.29
RNF170-201ENST00000240159 SPRED2Q7Z698 418 aa23.09■■□□□ 1.29
RNF170-201ENST00000240159 PABPC5Q96DU9 382 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms