RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 IGSF8Q969P0 613 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 BIRC7Q96CA5 298 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 MYO19Q96H55 970 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 OCSTAMPQ9BR26 566 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 NAA15Q9BXJ9 866 aaKnown RBP13.09□□□□□ -0.31
PDZD11-201ENST00000239666 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 MUC3BQ9H195 1237 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 TM7SF3Q9NS93 570 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 SAMSN1Q9NSI8 373 aaKnown RBP13.09□□□□□ -0.31
PDZD11-201ENST00000239666 ARHGEF38Q9NXL2 777 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 COX16Q9P0S2 106 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
PDZD11-201ENST00000239666 VANGL2Q9ULK5 521 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 PCDH15Q96QU1 1955 aa13.09□□□□□ -0.31
PDZD11-201ENST00000239666 A0A1W2PPC4 97 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 F8VZ95 297 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 MCF2LO15068 1137 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 ATP9BO43861 1147 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 RNGTTO60942 597 aaKnown RBP13.08□□□□□ -0.32
PDZD11-201ENST00000239666 PAGE1O75459 146 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 GJB3O75712 270 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 GRAP2O75791 330 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 FSBPO95073 299 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 IL1BP01584 269 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 ERBB2P04626 1255 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 CD59P13987 128 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 PDGFRAP16234 1089 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
PDZD11-201ENST00000239666 GEMIN4P57678 1058 aaKnown RBP13.08□□□□□ -0.32
PDZD11-201ENST00000239666 CDR2Q01850 454 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 MYL5Q02045 173 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 KCNMA1Q12791 1236 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 OVGP1Q12889 678 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 TAF5Q15542 800 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 STX1AQ16623 288 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 HLA-BQ31612 363 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 NEK5Q6P3R8 708 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 RBM43Q6ZSC3 357 aaKnown RBP13.08□□□□□ -0.32
PDZD11-201ENST00000239666 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
PDZD11-201ENST00000239666 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
PDZD11-201ENST00000239666 NAXDQ8IW45 347 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 C1orf216Q8TAB5 229 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 ZNF592Q92610 1267 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 SIK2Q9H0K1 926 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 DYRK4Q9NR20 520 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 DMTF1Q9Y222 760 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 ANKRD6Q9Y2G4 727 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 FHOD1Q9Y613 1164 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 HS3ST4Q9Y661 456 aa13.08□□□□□ -0.32
PDZD11-201ENST00000239666 MUC22E2RYF6 1773 aaPredicted RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 DRGXA6NNA5 263 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 VILLO15195 856 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 PCDHGA12O60330 932 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 PROS1P07225 676 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 RHOCP08134 193 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 SOX5P35711 763 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 ARRB1P49407 418 aaPredicted RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 CCT8P50990 548 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 GALCP54803 685 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 CDKAL1Q5VV42 579 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 DBX2Q6ZNG2 339 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 CACUL1Q86Y37 369 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 APCDD1Q8J025 514 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 ZNF366Q8N895 744 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 SETD7Q8WTS6 366 aaKnown RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 PPP1R16AQ96I34 528 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 MRGPRX2Q96LB1 330 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 VPS16Q9H269 839 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 C6orf106Q9H6K1 298 aaPredicted RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 TM9SF3Q9HD45 589 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 PPARGC1AQ9UBK2 798 aaKnown RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 XPO7Q9UIA9 1087 aaKnown RBP13.07□□□□□ -0.32
PDZD11-201ENST00000239666 SLCO3A1Q9UIG8 710 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 HS3ST2Q9Y278 367 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
PDZD11-201ENST00000239666 TBC1D3DA0A087WVF3 549 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 TBC1D3IA0A087WXS9 549 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 TBC1D3EA0A087X179 549 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 TBC1D3KA0A087X1G2 549 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 A0A1W2PP55 124 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 ILVBLA1L0T0 632 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 FAM221BA6H8Z2 402 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 TBC1D3FA6NER0 549 aaPredicted RBP13.06□□□□□ -0.32
PDZD11-201ENST00000239666 SMTNL1A8MU46 457 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 TTC34A8MYJ7 566 aa13.06□□□□□ -0.32
PDZD11-201ENST00000239666 TBC1D3LB9A6J9 549 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms