RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FLCNQ8NFG4 579 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 FCRL2Q96LA5 508 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-201ENST00000238688 ATP6V1G3Q96LB4 118 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 FAM118BQ9BPY3 351 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 DDX50Q9BQ39 737 aaKnown RBP13.53□□□□□ -0.24
SLIRP-201ENST00000238688 NAT9Q9BTE0 207 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 CDC42EP4Q9H3Q1 356 aaKnown RBP13.53□□□□□ -0.24
SLIRP-201ENST00000238688 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 SLC2A4RGQ9NR83 387 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 PSD3Q9NYI0 1048 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 TRPM5Q9NZQ8 1165 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 COX16Q9P0S2 106 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 ZMYM5Q9UJ78 669 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 COL4A2P08572 1712 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 OBSL1O75147 1896 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-201ENST00000238688 H3BQF6 201 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 TLR5O60602 858 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 MOSPD3O75425 235 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 FGF19O95750 216 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 RHOP08100 348 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 RHOQP17081 205 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 ATF6P18850 670 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 CCNCP24863 283 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 ATP5C1P36542 298 aaKnown RBP13.52□□□□□ -0.25
SLIRP-201ENST00000238688 GARSP41250 739 aaKnown RBP13.52□□□□□ -0.25
SLIRP-201ENST00000238688 CCR2P41597 374 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 NDST2P52849 883 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 SLC10A2Q12908 348 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-201ENST00000238688 TAF12Q16514 161 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 PARP6Q2NL67 630 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 C5orf22Q49AR2 442 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 C10orf120Q5SQS8 335 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 HECTD3Q5T447 861 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 TDRPQ86YL5 185 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 PYROXD2Q8N2H3 581 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 RTL3Q8N8U3 475 aaKnown RBP13.52□□□□□ -0.25
SLIRP-201ENST00000238688 FAM76AQ8TAV0 307 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 ADAM32Q8TC27 787 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 ING5Q8WYH8 240 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 TCEAL4Q96EI5 215 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 CRISPLD1Q9H336 500 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 MFSD1Q9H3U5 465 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 FBXL21Q9UKT6 434 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 YIPF1Q9Y548 306 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 INSL5Q9Y5Q6 135 aa13.52□□□□□ -0.25
SLIRP-201ENST00000238688 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 CDH16O75309 829 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 AGTP01019 485 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 CEBPBP17676 345 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 MAPKAPK2P49137 400 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 SLC11A2P49281 568 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 YBEYP58557 167 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-201ENST00000238688 USP46P62068 366 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 BASP1P80723 227 aaKnown RBP13.51□□□□□ -0.25
SLIRP-201ENST00000238688 IFRD2Q12894 506 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-201ENST00000238688 SLC29A2Q14542 456 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ANO4Q32M45 955 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 CCDC38Q502W7 563 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ANKRD20A2Q5SQ80 823 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 TMCO4Q5TGY1 634 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ANKRD20A1Q5TYW2 823 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 TTC39BQ5VTQ0 682 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ANKRD20A3Q5VUR7 823 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 AFMIDQ63HM1 303 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF449Q6P9G9 518 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 CCDC25Q86WR0 208 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 UMODL1-AS1Q8N2C9 162 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 GLIS1Q8NBF1 620 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 PSMG2Q969U7 264 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF512Q96ME7 567 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-201ENST00000238688 PLA2G2FQ9BZM2 168 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 CYP4F11Q9HBI6 524 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 RAB6BQ9NRW1 208 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 TMEM248Q9NWD8 314 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 OSER1Q9NX31 292 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 DLGAP2Q9P1A6 1054 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 CA14Q9ULX7 337 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 NEU3Q9UQ49 428 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 SLC27A5Q9Y2P5 690 aa13.51□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 SHISA7A6NL88 538 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 SRRM3A6NNA2 597 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 E7EVH7 732 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 E9PAM4 449 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 FAM72CH0Y354 149 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 I6L893 689 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 RNF103O00237 685 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 PRRG1O14668 218 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 RASGRF2O14827 1237 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 ZSCAN5DPP0CG00 497 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 HMGA1P17096 107 aaKnown RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 PTPN2P17706 415 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 FCARP24071 287 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 IFNAR2P48551 515 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 HARS2P49590 506 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms