RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 DNPEPQ9ULA0 475 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 HEXIM1O94992 359 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 KAT7O95251 611 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 HSPA9P38646 679 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 XRCC4Q13426 336 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 SYDE1Q6ZW31 735 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM3CQ92520 227 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 MAGEB5Q9BZ81 275 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 SORCS3Q9UPU3 1222 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM187AA6NFU0 413 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 RNF103O00237 685 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 PMPCBO75439 489 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 TIE1P35590 1138 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 LBRQ14739 615 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 PLEKHG6Q3KR16 790 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 RHBDF2Q6PJF5 856 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 IPMKQ8NFU5 416 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 FIBINQ8TAL6 211 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 GDAP1L1Q96MZ0 367 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 HINFPQ9BQA5 517 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 HEBP1Q9NRV9 189 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 AAR2Q9Y312 384 aaKnown RBP11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 MAD1L1Q9Y6D9 718 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM169AQ9Y6X4 670 aa11.36□□□□□ -0.59
TNFAIP3-201ENST00000237289 KPNA3O00505 521 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 MOSPD3O75425 235 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 TUBBP07437 444 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 GARSP41250 739 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 GEMP55040 296 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 LMAN2Q12907 356 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 SEPT6Q14141 434 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZNF783Q6ZMS7 281 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ADHFE1Q8IWW8 467 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 RBM12Q9NTZ6 932 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 APRTP07741 180 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 CCNCP24863 283 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 GJA4P35212 333 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 MAPK8P45983 427 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 BCL2L1Q07817 233 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 IL10RBQ08334 325 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC44A4Q53GD3 710 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 PITRM1Q5JRX3 1037 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 NADSYN1Q6IA69 706 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 RALGPS2Q86X27 583 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 CACUL1Q86Y37 369 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 SLC44A3Q8N4M1 653 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZNF513Q8N8E2 541 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ATXN2LQ8WWM7 1075 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZDHHC6Q9H6R6 413 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ELOVL2Q9NXB9 296 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZNF487B1APH4 448 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 FDFT1P37268 417 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 NRG1Q02297 640 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 EML3Q32P44 896 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM133BQ5BKY9 247 aaKnown RBP11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 ZDHHC14Q8IZN3 488 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 DCAF4L2Q8NA75 395 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 LRRN4Q8WUT4 740 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 OR8D1Q8WZ84 308 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 PRDM6Q9NQX0 595 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 FAM114A2Q9NRY5 505 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 DTLQ9NZJ0 730 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 NCKAP1Q9Y2A7 1128 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 SNX24Q9Y343 169 aa11.35□□□□□ -0.59
TNFAIP3-201ENST00000237289 C1QTNF3-AMACRE9PGA6 284 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 OPHN1O60890 802 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 ALDH1A2O94788 518 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 ACVRL1P37023 503 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 EIF4HQ15056 248 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 NOMO1Q15155 1222 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PON2Q15165 354 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 NCBP2-AS2Q69YL0 99 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 CCDC110Q8TBZ0 833 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 CYB5D2Q8WUJ1 264 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 NELL2Q99435 816 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 FEM1AQ9BSK4 669 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 EPB41L5Q9HCM4 733 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 ETNK2Q9NVF9 386 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 IKBKGQ9Y6K9 419 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 ATG13O75143 517 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 IL1BP01584 269 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 IGLV3-27P01718 113 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PLTPP55058 493 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 ARHGEF7Q14155 803 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 GLE1Q53GS7 698 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 SUGP1Q8IWZ8 645 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PDIK1LQ8N165 341 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 GRIN3AQ8TCU5 1115 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 WBP2Q969T9 261 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 PPP1R16AQ96I34 528 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 C10orf88Q9H8K7 445 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 BFARQ9NZS9 450 aa11.34□□□□□ -0.59
TNFAIP3-201ENST00000237289 TXNDC16Q9P2K2 825 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms