RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 FAM86C2PA6NEL3 165 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 B3GALNT1O75752 331 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CYP7B1O75881 506 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 LY86O95711 162 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 HMGCRP04035 888 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 SERPINA4P29622 427 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 PTGER2P43116 358 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 NRIP1P48552 1158 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 FXR2P51116 673 aaKnown RBP eCLIP5.37□□□□□ -1.55
KRR1-201ENST00000229214 BLKP51451 505 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 EXOSC10Q01780 885 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 MVKQ03426 396 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CD47Q08722 323 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 LAPTM5Q13571 262 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 LRRC24Q50LG9 513 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 DENND1BQ6P3S1 775 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 FAM83AQ86UY5 434 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ZNF564Q8TBZ8 553 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 TMEM159Q96B96 161 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 NXNL1Q96CM4 212 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 TMEM168Q9H0V1 697 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 RXFP1Q9HBX9 757 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CRTAC1Q9NQ79 661 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 RASSF1Q9NS23 344 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 KCNK4Q9NYG8 393 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 SRP68Q9UHB9 627 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 MRPS17Q9Y2R5 130 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 NOP16Q9Y3C1 178 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 TRIM66O15016 1216 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 SRP72O76094 671 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 MICAL2O94851 1124 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 PDHBP11177 359 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 IFNAR2P48551 515 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ALDH7A1P49419 539 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 GTF2IP78347 998 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 MEF2AQ02078 507 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 FGL1Q08830 312 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 PDIA2Q13087 525 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 LBRQ14739 615 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 KYNUQ16719 465 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 DGKDQ16760 1214 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 HSDL2Q6YN16 418 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CENPSQ8N2Z9 138 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 RBBP8NLQ8NC74 664 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 STRBPQ96SI9 672 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 MEIS3Q99687 375 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 MTFR1LQ9H019 292 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 SMYD2Q9NRG4 433 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ZNF214Q9UL59 606 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 STUB1Q9UNE7 303 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 NPC1O15118 1278 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 VARSP26640 1264 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 TNFRSF8P28908 595 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ALDH3A2P51648 485 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 NR1H2P55055 460 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ZNF33BQ06732 778 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 LCN1P1Q5VSP4 162 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 METTL2BQ6P1Q9 378 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 ZNF589Q86UQ0 364 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 EPS8L3Q8TE67 593 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 NSL1Q96IY1 281 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 LRRC4BQ9NT99 713 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 GTSE1Q9NYZ3 720 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CNOT8Q9UFF9 292 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 SFMBT1Q9UHJ3 866 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CLCA2Q9UQC9 943 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ERVK-10P10266 1014 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 BOP1Q14137 746 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 NR1I3Q14994 352 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CCDC142Q17RM4 750 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 EXOC3L2Q2M3D2 409 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 TMPRSS11AQ6ZMR5 421 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 ZBTB33Q86T24 672 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 CREB3L1Q96BA8 519 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 OTUD5Q96G74 571 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 MYO19Q96H55 970 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 RMDN3Q96TC7 470 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 SEPT5Q99719 369 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 ALG13Q9NP73 1137 aaKnown RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 RBAKQ9NYW8 714 aaPredicted RBP5.37□□□□□ -1.55
KRR1-201ENST00000229214 PCDHA13Q9Y5I0 950 aa5.37□□□□□ -1.55
KRR1-201ENST00000229214 MYL12BO14950 172 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 ALDH9A1P49189 494 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 RGS21Q2M5E4 152 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 AGMOQ6ZNB7 445 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 KATNAL2Q8IYT4 538 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 MRPS31Q92665 395 aaKnown RBP5.36□□□□□ -1.55
KRR1-201ENST00000229214 COX4I2Q96KJ9 171 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 CRAMP1Q96RY5 1269 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 CNPPD1Q9BV87 410 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 SPINK5Q9NQ38 1064 aaPredicted RBP5.36□□□□□ -1.55
KRR1-201ENST00000229214 ENTPD7Q9NQZ7 604 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 MED11Q9P086 117 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 PADI4Q9UM07 663 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 PLEKHA6Q9Y2H5 1048 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 SLX4Q8IY92 1834 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 PGRMC2O15173 223 aa5.36□□□□□ -1.55
KRR1-201ENST00000229214 NCK2O43639 380 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms