RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PTGIRP43119 386 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 KCNJ1P48048 391 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 DGKGP49619 791 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 C2orf54Q08AI8 447 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 TDGQ13569 410 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 SNX1Q13596 522 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 TMEM215Q68D42 235 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 TIGD7Q6NT04 549 aaPredicted RBP14.35□□□□□ -0.11
SEC61B-201ENST00000223641 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 CDKL3Q8IVW4 592 aaPredicted RBP14.35□□□□□ -0.11
SEC61B-201ENST00000223641 APCDD1Q8J025 514 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 ATPAF2Q8N5M1 289 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 CCDC33Q8N5R6 958 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 ALLCQ8N6M5 410 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 DCAF4L2Q8NA75 395 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 CSGALNACT1Q8TDX6 532 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 MAML1Q92585 1016 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 TMEM121Q9BTD3 319 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 MUC3BQ9H195 1237 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 GGA2Q9UJY4 613 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 NEU2Q9Y3R4 380 aa14.35□□□□□ -0.11
SEC61B-201ENST00000223641 H7C0C1 242 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 J3KR12 359 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 MATN3O15232 486 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 MTSS1O43312 755 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 CD160O95971 181 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 SRFP11831 508 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 GLULP15104 373 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 ATP5OP48047 213 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 SLC6A11P48066 632 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 IFI35P80217 286 aaPredicted RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 ARF5P84085 180 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 LMNB2Q03252 620 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 MESP2Q0VG99 397 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 WASHC5Q12768 1159 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 HNRNPDQ14103 355 aaKnown RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 DHX34Q14147 1143 aaKnown RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 GEN1Q17RS7 908 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 PITRM1Q5JRX3 1037 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 DARS2Q6PI48 645 aaKnown RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 CCDC13Q8IYE1 715 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 AHI1Q8N157 1196 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 TEX26Q8N6G2 289 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 NOA1Q8NC60 698 aaKnown RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 CCNYQ8ND76 341 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 WFIKKN2Q8TEU8 576 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 LRRN4Q8WUT4 740 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 HTR3CQ8WXA8 447 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 TTC17Q96AE7 1141 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 ZNF599Q96NL3 588 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 ASB2Q96Q27 587 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 KRT12Q99456 494 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 IL12RB2Q99665 862 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 C2orf49Q9BVC5 232 aaPredicted RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 C10orf88Q9H8K7 445 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
SEC61B-201ENST00000223641 DEC1Q9P2X7 70 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 AMACRQ9UHK6 382 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 ZNF148Q9UQR1 794 aa14.34□□□□□ -0.11
SEC61B-201ENST00000223641 C5orf60A6NFR6 353 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 ZSCAN5CA6NGD5 496 aaPredicted RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 RIOK3O14730 519 aaKnown RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 NARSO43776 548 aaKnown RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 SLU7O95391 586 aaKnown RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 GLDCP23378 1020 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 GDF10P55107 478 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 PFKPQ01813 784 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 AP1B1Q10567 949 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 FUT11Q495W5 492 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 INO80DQ53TQ3 878 aaPredicted RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 HEATR6Q6AI08 1181 aaKnown RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 RALGPS2Q86X27 583 aaPredicted RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 KLHL7Q8IXQ5 586 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 CCDC105Q8IYK2 499 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 LRRN4CLQ8ND94 238 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 TTC8Q8TAM2 541 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 GRK7Q8WTQ7 553 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 PNKPQ96T60 521 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 VAT1Q99536 393 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 SPON2Q9BUD6 331 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.12
SEC61B-201ENST00000223641 VPS51Q9UID3 782 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 VPS28Q9UK41 221 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 HPCAL4Q9UM19 191 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 DUSP12Q9UNI6 340 aa14.33□□□□□ -0.12
SEC61B-201ENST00000223641 SHISA7A6NL88 538 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 KCNN4O15554 427 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 SNAP91O60641 907 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 GCATO75600 419 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 CCNB1P14635 433 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 PTPN3P26045 913 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 CTHP32929 405 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 CLCN6P51797 869 aa14.32□□□□□ -0.12
SEC61B-201ENST00000223641 SULT2A1Q06520 285 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms